Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4928 |
Symbol | |
ID | 6246433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 2012399 |
End bp | 2013322 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642596665 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001861072 |
Protein GI | 186473730 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.595965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAGT TTGACTGGGA CAACCTACGC ATTTTTCTAG GCGCAGCACG GTCCCAATCC GCCCTCGAAG CGGCACACGC GCTCAAGATG AGCCAGTCCA CGATTTCGCG GCGGATCCAG CGTCTGGAAC GGGACACCGG TTCGAAACTG TTCGAACGAA GTTCGCAGGG CTTGCGCCTG ACGGCGGCAG GCCATCGACT ACTGGAACAT GTGGAAAGGC TAGAAACTAC CCTGCAGGCT GTTGAAACTA GCGTCTTCAG CGACTCGGTA ACTCTAACTG GCGAGATCCG CCTTGGCGCG ACGGAAGGGT TTGGAACGTT TTTTCTAGCG CCGCAAGTTA CACATTTCTG CGCCAGGCAT CCTGGAATCA CGGTCGACGT GCTCCCGTTG CCACGTAACG TCAATCTGTC CAAACGGGAG GCCGATGCAT CCGTCGCAAT CGACCGGCCA AGCGCCAACA GTTTCGTCAC GTGCAAGCTG ACCGAGTACC GGCTTCTGCC GTACGCTACC CCGCAATATC TAAGTGAGCA TCCTCCCATC AAAACAACCG AGGATCTCAT CGGTCACAGG TGGATTGACT ATGTCGACGA CCTGATCTTT TCGAACCAGC AGTTTTCGCT ACCGCGCTGG CTGCCGAGCC TCAAGCCTGT CTTCCGCAGC ACCAGTGTTA TCGCACAGGC CGAAGCGGTC CGAGCCGGAT TTGGGATCGG AGTGCTGCCA TGTTTCCTTG GAAGTCTGGG TGGAGATCTC GTACCCGTTC TGCCCGACCA AATAGATATA ACGCGAACTT TCTGGCTCGT TGCTCCGCCT GAGCGGCGCG AGCTTGCACG TGTGAAAGCC CTATGGGATT ACATACGCGA CGTAGCGGAA GCCAATCACG ACTTCCTAAT GGGTAATACT ACCGAGTCCG TCCGAATCGC ATGA
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Protein sequence | MNQFDWDNLR IFLGAARSQS ALEAAHALKM SQSTISRRIQ RLERDTGSKL FERSSQGLRL TAAGHRLLEH VERLETTLQA VETSVFSDSV TLTGEIRLGA TEGFGTFFLA PQVTHFCARH PGITVDVLPL PRNVNLSKRE ADASVAIDRP SANSFVTCKL TEYRLLPYAT PQYLSEHPPI KTTEDLIGHR WIDYVDDLIF SNQQFSLPRW LPSLKPVFRS TSVIAQAEAV RAGFGIGVLP CFLGSLGGDL VPVLPDQIDI TRTFWLVAPP ERRELARVKA LWDYIRDVAE ANHDFLMGNT TESVRIA
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