| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4851 |
|---|
| Symbol | |
|---|
| ID | 6246364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 1918126 |
|---|
| End bp | 1919418 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642596596 |
|---|
| Product | 4-aminobutyrate aminotransferase |
|---|
| Protein accession | YP_001861003 |
|---|
| Protein GI | 186473661 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0160] 4-aminobutyrate aminotransferase and related aminotransferases |
|---|
| TIGRFAM ID | [TIGR00700] 4-aminobutyrate aminotransferase, prokaryotic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGATA CCAATGCTGA TCTGCTCGAT CGCAAGAACG CCGCTACACC GCGCGGTGTG
GGAGTCATGT GTGAGTTCTA CGCTGCACGC GCCGAGAACG CGGAGCTTTG GGACGTTGAA
GGTCGCCGCT TCATCGACTT CGCAGCGGGA ATCGCGGTGT GCAACACTGG GCATCGTCAC
CCAAAGATTG TGGCAGCGAT TCGCGAACAA CTCGACTTTT TCACGCACAC CGCCTATCAG
ATCGTCCCGT ACGCTTCCTA CGTAACGCTC GCCGAGAAGA TCAACGAGCG TGCACCGGGT
AACTATCCCA AGAAAACAGC TTTCTTCACG ACCGGGGCTG AAGCCGTTGA GAATGCAATC
AAGATCGCAC GCGCGGCAAC TGGTCGATCC GGCGTGATCG CATTTACGGG CGGGTTCCAC
GGTCGCACGA TGATGGGGAT GGCGCTCACG GGGAAAGTCG CGCCTTACAA GTTGAATTTT
GGTCCCTTCC CGGCCGAAGT CTTCCACGCC CCCTTCCCAA ATCCGCTACA TGGGGTGACT
ACGACGGACT CGCTGAAGGC TATCGAACAT CTGTTCAAGG CAGACATTGA ACCAAAGCGT
GTTGCGGCAA TCATCTTCGA GCCGGTGCAA GGGGAAGGTG GCTTCCACCC AGCTCCGGCC
GAATTCGTGC GAGCTCTGCG CAAACTTTGC GATGAGCACG GCATTTTGCT GATAGCTGAT
GAGGTACAGA CGGGCTTTGC ACGGACAGGC AAACTCTTCG CGATGCAACA CTACGACGTC
GTGCCAGATC TGATGACGAT GGCAAAGAGC CTTGCGGGCG GCATGCCTCT GTCGGGTGTC
GTGGGTCGAG CCGAGTTGAT GGATGCTGCA GCGCCGGGCG GGCTTGGCGG CACCTATGCT
GGTAACCCTC TCGCAATCGC GGCGGCACAT GCCGTCCTCG ACATCATTGA TGAAGAGGCA
CTCTGCGACC GTGCAACACA ACTCGGCGAC CGAATCAAGG CAAACCTGAA GAACCTTCGG
GAAATCGTGC CTCAGATCGC GGATATCCGA GGGCCGGGTG CAATGGTCGC CGTCGAATTC
TGCAAACCCG GTTCCGAGCA CGAGCCAGAT CCGACGTTCA CGAAACAGGT ACAGGCAAAA
GCGCTCGAGC GAGGCCTGCT ACTCCTTGTT TGTGGCACGT ACGCAAATGT CATCCGCTTC
CTGTTCCCGC TGACAGTTGA AGAGAATGTG TTTGACGAAG CTCTTTCGAT CCTTCAGGAC
GTGTTGAAGG AAACCGCCGC TGTACCAGCC TGA
|
|---|
| Protein sequence | MSDTNADLLD RKNAATPRGV GVMCEFYAAR AENAELWDVE GRRFIDFAAG IAVCNTGHRH
PKIVAAIREQ LDFFTHTAYQ IVPYASYVTL AEKINERAPG NYPKKTAFFT TGAEAVENAI
KIARAATGRS GVIAFTGGFH GRTMMGMALT GKVAPYKLNF GPFPAEVFHA PFPNPLHGVT
TTDSLKAIEH LFKADIEPKR VAAIIFEPVQ GEGGFHPAPA EFVRALRKLC DEHGILLIAD
EVQTGFARTG KLFAMQHYDV VPDLMTMAKS LAGGMPLSGV VGRAELMDAA APGGLGGTYA
GNPLAIAAAH AVLDIIDEEA LCDRATQLGD RIKANLKNLR EIVPQIADIR GPGAMVAVEF
CKPGSEHEPD PTFTKQVQAK ALERGLLLLV CGTYANVIRF LFPLTVEENV FDEALSILQD
VLKETAAVPA
|
|---|
| |