| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4707 |
|---|
| Symbol | |
|---|
| ID | 6246223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1772487 |
|---|
| End bp | 1773371 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642596455 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_001860862 |
|---|
| Protein GI | 186473520 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.0240771 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGC GCCACATCGA AGTTTTTCAC GCCGTCATGC GTACCGGCTC GCTGTCGAAG
GCAGCCGAGC TGTTGTGCGT GTCGCAGCCT GCCGTCAGCA AGGTGCTCGC CCACGCCGAG
CGCAGCGCGG GCCTCATGCT CTTCAACCGC GTTCACGGCC GCCTTCAGCC GACGCGCGAA
GCCGAGCTGC TGTTCTCCGA AACGCAGAAA CTCCAGGCGA ATCTCGACAG CATTCGCGAT
CTCGCGCGCA ACCTGGCGCT GCAGCCGGAA GGGCATTTGC GCATCGGCTG TCTGCCGAGT
CTCGGCCTGA GCGTGATTCC GTCCGCCGTC GAGGCGTTTC GCGTGGCGTA TCCACGCGTG
TCGATGCGCA TCCAGACGCG CCACACGGAG GAACTGCTGA ACGCGCTGCT CACGCGCGAA
CTCGATCTGG CTGTGGCGCT CAGTCCGCCC GCGCGGCCGG GCATCGCGTC GGTCGAACTG
GGGCGCACGC CCGTCGTGTG CGTCGGTCCG CCCGCAGACG ACCGCGAAGA CACAGACGAT
CAGCCGACGA CGCTGCAAGC GGTCGTCGAA GGCGACTGGA TCAGCATCGG CGATGCGGAT
CCGCTGGGCG AGATGATCGG CAATGCGCTG GAAGCATTGG GGCTCGACGG TCGCGCGCCA
TCTGTGGAGG CGCACACCTG GCATGTCGCC CGCGCGCTCG CCGCGCGTGG TATCGGACAT
GCGCTGCTCG ACGAGTTGAC GGCAAGCAGC GGTGCGGAAG CCGTGAGCGT GAGACCCCTC
GCGCCGCCGC TGTCGGTTGG CGTGTTCGCG TTGTGGCGCG ACGGCGGTCT GAGTTCGAAG
GCAGGCAACG CATTCGTCGA CGTGCTGCGC GCACGTTTCG CGTGA
|
|---|
| Protein sequence | MRLRHIEVFH AVMRTGSLSK AAELLCVSQP AVSKVLAHAE RSAGLMLFNR VHGRLQPTRE
AELLFSETQK LQANLDSIRD LARNLALQPE GHLRIGCLPS LGLSVIPSAV EAFRVAYPRV
SMRIQTRHTE ELLNALLTRE LDLAVALSPP ARPGIASVEL GRTPVVCVGP PADDREDTDD
QPTTLQAVVE GDWISIGDAD PLGEMIGNAL EALGLDGRAP SVEAHTWHVA RALAARGIGH
ALLDELTASS GAEAVSVRPL APPLSVGVFA LWRDGGLSSK AGNAFVDVLR ARFA
|
|---|
| |