| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4680 |
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| Symbol | |
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| ID | 6246197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1746853 |
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| End bp | 1748538 |
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| Gene Length | 1686 bp |
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| Protein Length | 561 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642596429 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001860836 |
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| Protein GI | 186473494 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.840786 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.137791 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT TCGCCACGCT CTACACGGCA CTCGACGCGA CCACGTCGAC ACGCGACAAG
CTCGACGCGC TGATCACCTA CTTCCATGCC GCGCCGCCCG AAGACGCGGC ATGGGCGTCG
TATTTCCTGG CGGGCGGCAA GCCTCGCCAG TCGGTGCCGA CGCGCCTGCT CACCGAGATC
GCGCGTACGC ACGCGGGTTT GCCGGAGTGG CTGTTCGAAG AGTCGTATCA GGCCGTCGGC
GATCTCGCGG AGACCATTGC GCATGTGTTG CCGCCTGCTG CTCGCACGTC CGAACTGGGG
CTCACGCAAT GGATCGAAGA ACGCATCCTG ACACTGCGCG GTGCTTCGCC GGAAACACTG
CGTGAGCGTC TCGTCGCGTA CTGGAACGAA CTCGACTGGA GCGGCCGCTT CCTTTTCACG
AAGCTGATCG GCGGGGGCTT TCGGGTAGGT GTCGCGCGGC AGCTCGTCGT GCGCGCGCTC
GCCGACGTCG CGGGCGTCGA TCACAAGCTG ATCGCACAGC GCATGGTCGG CTGGACGGAT
TCGAGCCAGC CGCCCGACGC CGCGCGCTAT CTGCGTCTCA TCGCGCCCGC CCCTTCGGAC
GATGCAAACG GCGACGCCGA AGCCGCGCTT GTGCGTCACG AAAGCGAGCG CGGCCTGCCC
TTCCCGTTCT TTCTCGCACA TCCGCTGCAA TCCGATCCCG CGACACTCGG CGATCCGTCA
TCGTGGTTCG CCGAATGGAA GTGGGACGGC ATACGCGCGC AAGTCGTGAA ACGCGATGGC
CGCGTGTGGG TGTGGTCGCG CGGCGAAGAT CTGATCACGG ACCGCTTTCC CGAAGTCGTC
GCGTTGGGCG AAGCGCTGCC GGACGGTCAT GTGCTCGACG GCGAGATTCT CGCATGGGAA
CCCGACGCGC TCGCGCCGCT GCCCTTCGCG AGGCTGCAAC CGCGCATCAC GCGCAAGTCG
CTGACGAAGC GCGTGCTCGC CGAATCGCCC GCCACGTTCC TCGCCTACGA CCTGCTGGAA
TCGCGCGGCG AGGACTTGCG CATGCGGCCG CTGCACGAAC GGCGCGCGCG GCTCGACACG
CTGGGCGTAA CGCTCGCCGA TACCCTCGCG AAAGATCTGC TGCGTGTGTC GCCCCTCGTC
GATGCACACG ACTGGCACGC GCTTGCCGCA TTGCGCGACG AAAGCCGCGC ACGCGGCGTC
GAAGGATTGA TGCTCAAGGA GCGCGCGTCG ATGTACGGCG TCGGCCGCAC CAAGGCGGCG
GGCACATGGT GGAAATGGAA GATCGACCCC TATGCGATCG ACGCCGTGCT GATCTACGCG
CAACGCGGCC ACGGGCGGCG CGCGAGCCTC TACACCGATT TCACGTTCGC CGTCTGGGAC
GAAGCGGACG GCGTGCGTAC GCTCGTGCCC TTCGCGAAGG CCTACTCGGG CCTGACAGAT
GATGAGATGC GCGAAGTCGA TGCGATCGTG CGCAGGACGA CCGTCGAAAA ATTCGGCCCG
GTGCGCAGCG TCACACCGAC GCTCGTGTTC GAGATCGGCT TCGAAGGCAT TCAGGCGAGC
CCGCGTCACA AGTCCGGCGT GGCCGTGCGC TTTCCGCGCA TGCTGCGCTG GCGCACCGAC
AAGCATATCG ACGACGCCGA CACACTCGCG ACGCTCAAGG GCTTCATCGA CGAACGCGCA
CGCTGA
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| Protein sequence | MKRFATLYTA LDATTSTRDK LDALITYFHA APPEDAAWAS YFLAGGKPRQ SVPTRLLTEI
ARTHAGLPEW LFEESYQAVG DLAETIAHVL PPAARTSELG LTQWIEERIL TLRGASPETL
RERLVAYWNE LDWSGRFLFT KLIGGGFRVG VARQLVVRAL ADVAGVDHKL IAQRMVGWTD
SSQPPDAARY LRLIAPAPSD DANGDAEAAL VRHESERGLP FPFFLAHPLQ SDPATLGDPS
SWFAEWKWDG IRAQVVKRDG RVWVWSRGED LITDRFPEVV ALGEALPDGH VLDGEILAWE
PDALAPLPFA RLQPRITRKS LTKRVLAESP ATFLAYDLLE SRGEDLRMRP LHERRARLDT
LGVTLADTLA KDLLRVSPLV DAHDWHALAA LRDESRARGV EGLMLKERAS MYGVGRTKAA
GTWWKWKIDP YAIDAVLIYA QRGHGRRASL YTDFTFAVWD EADGVRTLVP FAKAYSGLTD
DEMREVDAIV RRTTVEKFGP VRSVTPTLVF EIGFEGIQAS PRHKSGVAVR FPRMLRWRTD
KHIDDADTLA TLKGFIDERA R
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