| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4663 |
|---|
| Symbol | |
|---|
| ID | 6246180 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 1731702 |
|---|
| End bp | 1733273 |
|---|
| Gene Length | 1572 bp |
|---|
| Protein Length | 523 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642596412 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001860819 |
|---|
| Protein GI | 186473477 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.502876 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.696249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGCC CGTCCTATCA TCGACGCATG AATACGTCTC CTGCACCCCA TTTCACGCCG
GCGCTCGCGC GTATCGTCGC GACGGTCAGC ATTGGCTTCG TCGTCACGCA ACTCGACGTG
ACCATCGTCA ATATCGCGCT CGCGAAGATC GGTGCGGACC TGGGCGCGAA CGTCACGGGC
CTGCAATGGA TTGTCGATGC GTACACGCTT GCGTTCGCCG TGCTCATGCT GTCGGCGGGT
GTGCTCGGCG ACCGCTTCGG CGCGCGCAGA ATGTTCGCCT GCGGAATCGC GCTGTTCGCG
GCGGCGTCGC TCGCGTGCGG GCTCGCACCC GATGCAGCGA CGCTCGTCGG TGCGCGCGCC
GTGCAAGGGA TGGGCGCGGC GGCGATGCTG CCGAATTCGC TTGCTCTGCT CAACGCGGCG
TGCGGCCACG ATCCGAAGCT GCGCGCCCGC GCGGTCGGCC TGTGGACGGC AGCGGGCGCG
ATTGCGATCG CTGCGGGGCC GGTGATCGGC GGACTGCTGA TTGCCGCGTT CGGCTGGCGC
GCGATCTTTC TCGTCAATCT GCCGATCTGC GCATTGGGGC TTGCGGCGAC GTTCGCGTGG
GTGCCGCTTG CGCCATCGAC GGCATCGGCC GCAGACACGC CGGAACGTTC GCGGAATGAC
CCGGCCGCGC GCGGCATCGA TCCAGCCGGT CAGCTGCTTG CAATCGTCGC GCTGACAGCT
TTTACAGGCG CCGTGATCGA ATGGCGTCCG CTCGGGCTCA GGCATCCGCT GGTCGGCGGC
GGCTTCGTGC TCGCACTCAT CGCGGCGGCC GCGTTCATCG TCGCCGAACG GCGGGTGCGC
ACGCCGATGC TGCCGCTCAC GTTCTTCAGC AACCGCACGT TCAGCGCTGC CGTGCTGTTC
GGCATCTGCG TGAATCTCAC CTACTACGGC GTGGTCTTCG TGTTGAGCCT GTATCTGCAG
CATGCGCGCG GCGAGACGGC GCTGCAGGCC GGCCTCGCGT TTCTGCCGCT GACAGGCGGG
TTCCTCGTGT CGAACGTTGC GAGCGGCTGG GTGGTCGGGC GTTGCGGCGC GCGCGTGCCG
ATGATCGCCG GCGCGATGAC GGCGGCGCTT GGCTACGGGC TCCTGCATTT CGTCGGTGCC
GCGTCGCCGC TGTGGGCCCT GCTCGTGCCG TTCCTGCTGA TTCCGTCCGG CATGGGACTC
GCGGTGCCCG CGATGACTAC GGCCGTGCTC GCATCCGCCG ACAGGCAGCG TGCAGGCACG
GCATCGGCCG TCCTCAACAC AGCGCGGCAG GCGGGCGGCG CTGTCGGCGT GGCGACGTTC
GGCGCGCTCG CGGGCGCCTC GGATGCGGCA GGCTCAGCAG TCGCGGCGCA AGTCGTGGCA
GCCCTGCACG CGTCGACGCT GATCTCCGCG TGCATCCTGC TGTGCGCGCT CGGACTCGCA
TGCCTCGTGC ATCCGCAAGC GCACGCTCAC GACGCGTCGG AGCACAGCGC CGGAAACGCA
CGAAACGCAC CAAACGCACC AAACGCACGA AACGCCCGCA ACGGCGCGCG GCCCGCTGGC
ACCAGCAAAT GA
|
|---|
| Protein sequence | MAGPSYHRRM NTSPAPHFTP ALARIVATVS IGFVVTQLDV TIVNIALAKI GADLGANVTG
LQWIVDAYTL AFAVLMLSAG VLGDRFGARR MFACGIALFA AASLACGLAP DAATLVGARA
VQGMGAAAML PNSLALLNAA CGHDPKLRAR AVGLWTAAGA IAIAAGPVIG GLLIAAFGWR
AIFLVNLPIC ALGLAATFAW VPLAPSTASA ADTPERSRND PAARGIDPAG QLLAIVALTA
FTGAVIEWRP LGLRHPLVGG GFVLALIAAA AFIVAERRVR TPMLPLTFFS NRTFSAAVLF
GICVNLTYYG VVFVLSLYLQ HARGETALQA GLAFLPLTGG FLVSNVASGW VVGRCGARVP
MIAGAMTAAL GYGLLHFVGA ASPLWALLVP FLLIPSGMGL AVPAMTTAVL ASADRQRAGT
ASAVLNTARQ AGGAVGVATF GALAGASDAA GSAVAAQVVA ALHASTLISA CILLCALGLA
CLVHPQAHAH DASEHSAGNA RNAPNAPNAR NARNGARPAG TSK
|
|---|
| |