Gene Bphy_4636 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4636 
Symbol 
ID6246153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1706593 
End bp1708158 
Gene Length1566 bp 
Protein Length521 aa 
Translation table11 
GC content65% 
IMG OID642596385 
ProductRND efflux system outer membrane lipoprotein 
Protein accessionYP_001860792 
Protein GI186473450 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00362376 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.387542 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGGT TTGAACAAAC CCGCAACCTG AGTGGCTTCG GACGAGCGGC GGCGAGCGCG 
CTGCTGATGC TGCTGCTTGC GGCGTGCTCG GTGGAGCCGA CGTACAACCG TCCCGACGCA
CCGACACCGT CGGCATTCAA GGAAGCGCCC GCTACGGCCA CGACGGGCGA CGCAGCAGCC
GCGCCGCTGC CCGCGAGCGA AGCGGGCACG TGGAAGACGG CCGAGCCCGC CGAGGACGCG
CATCGCGGCG AATGGTGGAC CGTATTCGGC GATTCGACGC TCAACGCGCT CGAAAAGCAG
GCGGCCGATG CGAATCAGGA TCTGAAGGCA GCCGCCGCGC GCGTGCAGCA GTCGCGCGCG
CTGACGAACG AGGCGCGCGC CGCGTGGTAC CCGTCGATCG ATGCAGGCTT CGGTCCGACG
CGCGAACGGC TGTCGCCGGC TTCGCAGAAC CTGCCTAACA ATGCGAACGT GCCGACGCAA
ACGCTCTGGC GTGCGCAGAC TACGGTTGCG TATGAAGTCG ACCTGTTTGG CCGCGTGAGT
TCGAACGTGC ATGCAGCGAG TGCCGACGAG GCGCAGAGCG AAGCGTTGTT CCGCTCGGTG
CAGCTTGCGT TGCAGGCCGA CGTCGCGCAG AACTATTTCC AGTTGCGCGA GTTCGATACG
CAGTTGAGCC TGTATCGTCA GACGGTGACG TTGCGTGAAA ACGCGTTGAA GCTCGTCGAG
CGACGCTTCA ACGAAGGCGA CATCAACGAA CTGGACGTAT CGCGTGCCCG CAATGAACTG
GCGACGGCGC GCGCCGATGC TGTCGGCGTC GCGCGTCAGC GTGCGGCATC GGAGCATAGC
CTCGCGATCC TGCTCGGCAA GCCGCCTGCG GACTTTACGT TCCCCGAGAC GCCGCTCGCG
CCCGTGACGG TGCAAGTGCC TGCCGGATTG CCATCTGCGC TGCTCGAGCG TCGTCCGGAT
ATCTCCGCGG CGGAGCGCGG CATGGCGGCC GCGAACGCAC GCGTCGGTCT CGCCAAGTCG
GCATTCTTCC CGAAGCTCGA CATCACAGGT GCATTCGGTT TCGAATCGGC GACGCTCGGA
GATCTGTTCA TGTGGTCGAG CCGTGCGTTC CTGCTCGGTC CGTTCGCGGG CACCGCGCTG
ACGGTGCCGA TCTTCGACGG CGGACGGCGC AAGGCGAATC TCGCGAACGC GCGCGCGAAG
TATGACGAGG ACGTTGCGCA GTATCGTCAG CAGGTGCTCG TGGCGTTCCG CGAAGTCGAG
GACAACCTGT CGGACCTGCG TCTGCTCGGC GATCAGACGC GTGAGCAGAA CAATGCCGTC
AACGCCTCGC AGCGCGCCGA ACATCTGTCG CAGACGCAAT ATCAGGAAGG ACAGGTCAGC
TATCTCGACG TGATCGATGC CCAGCGCCAG GTGCTGCAGT CGCAACTGCA ATTGAGTCAT
CTCGCGGGCA CGCAGGCGGT GGCGACCGTC AACCTGATTC GCGCGCTCGG CGGCGGATGG
GGCGACGTGA AGACGGATGT GGGCAACGCG GACACGGCCG CGCAGGCGCA ACTGGCGAAG
CGTTGA
 
Protein sequence
MKRFEQTRNL SGFGRAAASA LLMLLLAACS VEPTYNRPDA PTPSAFKEAP ATATTGDAAA 
APLPASEAGT WKTAEPAEDA HRGEWWTVFG DSTLNALEKQ AADANQDLKA AAARVQQSRA
LTNEARAAWY PSIDAGFGPT RERLSPASQN LPNNANVPTQ TLWRAQTTVA YEVDLFGRVS
SNVHAASADE AQSEALFRSV QLALQADVAQ NYFQLREFDT QLSLYRQTVT LRENALKLVE
RRFNEGDINE LDVSRARNEL ATARADAVGV ARQRAASEHS LAILLGKPPA DFTFPETPLA
PVTVQVPAGL PSALLERRPD ISAAERGMAA ANARVGLAKS AFFPKLDITG AFGFESATLG
DLFMWSSRAF LLGPFAGTAL TVPIFDGGRR KANLANARAK YDEDVAQYRQ QVLVAFREVE
DNLSDLRLLG DQTREQNNAV NASQRAEHLS QTQYQEGQVS YLDVIDAQRQ VLQSQLQLSH
LAGTQAVATV NLIRALGGGW GDVKTDVGNA DTAAQAQLAK R