| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4635 |
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| Symbol | |
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| ID | 6246152 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 1703393 |
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| End bp | 1706578 |
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| Gene Length | 3186 bp |
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| Protein Length | 1061 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642596384 |
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| Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
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| Protein accession | YP_001860791 |
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| Protein GI | 186473449 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.730926 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.35721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATAT CCAAATTCTT CATCGACCGG CCGATCTTCG CTGGCGTGCT ATCGGTCCTG
ATTCTGCTGG CCGGTCTGAT CGCCGTGTTC CAGTTGCCGA TCTCCGAGTA TCCGGAAGTG
GTGCCGCCTT CCGTCGTGGT GCACGCGCAG TATCCGGGCG CGAACCCGAA GGTGATCGCG
GAAGCTGTCG CGTCGCCGCT CGAAGAGCAG ATCAACGGCG TCGAAAACAT GCTGTACATG
CAGTCGCAGG CCAATAGCGA CGGCAATCTC ACGCTGACGG TCACGTTCAA GCTCGGCACG
AATCCCGACC TTGCGACGCA GCTTGTGCAG AACCGCGTGA ACCAGGCGCT GCCGCGTCTG
CCCGAAGACG TGCAGCGTCT CGGCGTGACC ACGATCAAGA GCTCGCCGAC GCTGACGATG
GTCGTGCACC TCATCTCGCC GAACGACCGT TACGACATGA CCTATCTGCG CAACTACGCG
CTGCTCAACG TGAAGGACCG TCTCGAGCGG ATCAAGGGCG TCGGGCAGGT TCAGCTGTGG
GGCGCGGGCG ACTACTCGAT GCGCGTGTGG CTTGATCCGC AGAAGGTCGC GCAACGCAAT
CTGACTGCAA TGGAAGTGGT CAGCGCGATT CGCGAGCAGA ACATTCAGGT CGCGGCGGGG
GTGATCGGCG CATCGCCTTC CGTGCCGGGC ACGGCGCTGC AACTGTCGGT GAATGCGCGG
GGCCGCCTGA AGACGGAAAG CGAATTCGGC GACATCGTCG TGAAGACGGC GCCCGATGGA
GCCGTCACCT ATCTGCGCGA CATCGCGCGC ATCGAACTCG CTGCTTCCGA ATACGGCCTT
CGTTCGCTGC TCGACAACAA GCCGGCGGTT GCAATGGCGA TCAACCAGTC GCCGGGCGCG
AACTCGCTGC AGATTTCCGA CGAAGTTCGC CAGACGATGA AGGAACTCAG CGCGGATTTC
CCGGCGGGCG TCGAATACCG CATCGTGTAT GACCCGACGC AGTTCGTGCG TTCGAGTATC
GAGGCCGTCG TGCACACGCT GCTCGAAGCG ATTGCGCTCG TAGTGATCGT GGTGATCGTG
TTCCTGCAAA CGTGGCGTGC GTCGATCATT CCGCTGATCG CAGTACCCGT GTCGATCGTC
GGGACATTCT CGCTGCTGCT CGCCTTCGGC TTCTCGATCA ATGCGCTGTC GCTGTTCGGA
ATGGTGCTCG CAATCGGTAT CGTGGTCGAC GATGCGATCG TGGTGGTGGA GAACGTCGAG
CGGAACATCG AAAGCGGGCT GAGTGCGAGA GATGCGACCT ACAAGGCGAT GCAGGAAGTG
AGCGGACCGA TCATCGCTAT CGCGCTCACG CTGGTTGCCG TGTTCGTGCC GCTCGCGTTC
ATGTCGGGTC TGACGGGCCA GTTCTACAAG CAATTCGCGA TGACGATCGC GATCTCCACG
GTGATATCGG CATTCAACTC GCTCACGCTG TCGCCCGCAC TGTCGGCGAT GTTGCTGCGC
GGTCATGGCG CGAAGGAAGA CTGGCTCACG CGTCTGATGA ACCGCCTGCT GGGCCGTTTC
TTCGCAGCGT TCAACAAGGT GTTCCATCGC GGCTCGGATA GCTATGGCCG CGGCGTGAAC
GGCGTGCTCA AGCGCAAGGG CGCGATGCTG GTCGTGTATG CGGTGCTGCT GGGCCTGACG
GTGCTCGTTA CGCGTATCGT GCCGGGCGGC TTCGTGCCGG CGCAGGACAA GGAGTATCTG
ATTGCGTTCG CGCAGTTGCC CAACGGCGCA TCGCTCGATC GCACGGAGAA GGTGATTCGC
GACATGAGCG CGATCGCGCT GAAGCAGCCG GGCGTGGAGA ACGCGGTCGC GTTCCCGGGT
CTGTCCGTGA ACGGCTTCAC GAACAGTTCG AGCGCGGGCA TCGTGTTCGT CGCGCTCAAG
CCGTTCGACC AGCGCAAGGG CAAGGCATTG TCGGCGGGTG CGATTGCGGG TGCATTGAAC
CAGAAGTACG GCTCGATCAA GGACTCGTTC GTCGCCGTGT TCCCGCCGCC GCCCGTGCTG
GGTCTCGGTA CGTTGGGCGG CTTCAAGATG CAGCTGGAAG ATCACGGCTC GCTCGGTTAC
GCGGAATTGA ACAAGGCAAC GGAAGCGTTC ATCAAGAAGG CGGCGGCGAC GCCCGAACTG
GGCCCGACGT TCTCGAGCTA TCAGATCAAC GTGCCTCAGC TGAACGTCGA TCTCGATCGC
GTGAAGGCGA AGCAGCTGGG CGTGCCCGTG ACGGATGTGT TCAATACGAT GCAGGTGTAT
CTCGGTTCGC TGTACGTGAA CGACTTCAAC CGTTTCGGCC GTGTGTATCA GGTGCGCGTG
CAGGCGGATG CGCCGTTCCG TCAACAGGCC GACGACATCC TGCAGCTGAA GACGCGCAAC
GTGAATGGCG ACATGGTGCC GCTGTCGTCG CTGGTGACGG TGACGCCGAC CTATGGTCCA
GAAATGGTGG TGCGCTACAA CGGCTTCACG GCAGCCGATA TCAACGGCGG TCCGGCGCCC
GGATTCTCGT CGGGTGAAGC GCAGAATGCA GCGGAGCGCA TTGCGGCCGA AGTGTTGCCG
AAGGGTGTGA AGTTTGAATG GACCGACCTC ACGTATCAGC AGATTCTCGC GGGCAATGCT
GGCTTGTGGG TGTTCCCGAT CAGCGTCCTG CTCGTGTTCC TCGTGCTCGC TGCGCTGTAC
GAGAGCCTGA CGCTGCCGCT CGCGGTGATC CTGATCGTGC CGATGAGCGT GCTGTCGGCG
CTGACGGGCG TGTGGCTCAC GCAGGGCGAC AACAACATCT TCACGCAGAT CGGCTTGATG
GTGCTGGTGG GGCTGGCGTC GAAGAACGCG ATTCTGATCG TCGAGTTCGC CCGTGAGCTG
GAACACGACG GACGCACGCC GCTGCAGGCC GCTATCGAGG CGAGCCGCAT GCGTCTGCGG
CCCATTTTGA TGACCTCGAT CGCGTTCATC ATGGGCGTGG TTCCGCTGGT GCTATCGAGC
GGCGCAGGTT CCGAAATGCG TCATGCGATG GGCGTGGCCG TGTTCTTCGG CATGTTGGGC
GTGACGCTGT TCGGTCTGAT GCTGACGCCG GTGTTCTACG TGGTGCTGCG CACGCTCGCG
GGCGGCAAGA TTCATGTCGC GCAGAAGGAC TCGCCGCATC TCGTCGCGCA CACGACGGAT
GCATGA
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| Protein sequence | MNISKFFIDR PIFAGVLSVL ILLAGLIAVF QLPISEYPEV VPPSVVVHAQ YPGANPKVIA
EAVASPLEEQ INGVENMLYM QSQANSDGNL TLTVTFKLGT NPDLATQLVQ NRVNQALPRL
PEDVQRLGVT TIKSSPTLTM VVHLISPNDR YDMTYLRNYA LLNVKDRLER IKGVGQVQLW
GAGDYSMRVW LDPQKVAQRN LTAMEVVSAI REQNIQVAAG VIGASPSVPG TALQLSVNAR
GRLKTESEFG DIVVKTAPDG AVTYLRDIAR IELAASEYGL RSLLDNKPAV AMAINQSPGA
NSLQISDEVR QTMKELSADF PAGVEYRIVY DPTQFVRSSI EAVVHTLLEA IALVVIVVIV
FLQTWRASII PLIAVPVSIV GTFSLLLAFG FSINALSLFG MVLAIGIVVD DAIVVVENVE
RNIESGLSAR DATYKAMQEV SGPIIAIALT LVAVFVPLAF MSGLTGQFYK QFAMTIAIST
VISAFNSLTL SPALSAMLLR GHGAKEDWLT RLMNRLLGRF FAAFNKVFHR GSDSYGRGVN
GVLKRKGAML VVYAVLLGLT VLVTRIVPGG FVPAQDKEYL IAFAQLPNGA SLDRTEKVIR
DMSAIALKQP GVENAVAFPG LSVNGFTNSS SAGIVFVALK PFDQRKGKAL SAGAIAGALN
QKYGSIKDSF VAVFPPPPVL GLGTLGGFKM QLEDHGSLGY AELNKATEAF IKKAAATPEL
GPTFSSYQIN VPQLNVDLDR VKAKQLGVPV TDVFNTMQVY LGSLYVNDFN RFGRVYQVRV
QADAPFRQQA DDILQLKTRN VNGDMVPLSS LVTVTPTYGP EMVVRYNGFT AADINGGPAP
GFSSGEAQNA AERIAAEVLP KGVKFEWTDL TYQQILAGNA GLWVFPISVL LVFLVLAALY
ESLTLPLAVI LIVPMSVLSA LTGVWLTQGD NNIFTQIGLM VLVGLASKNA ILIVEFAREL
EHDGRTPLQA AIEASRMRLR PILMTSIAFI MGVVPLVLSS GAGSEMRHAM GVAVFFGMLG
VTLFGLMLTP VFYVVLRTLA GGKIHVAQKD SPHLVAHTTD A
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