Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4383 |
Symbol | |
ID | 6245905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 1412511 |
End bp | 1413284 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642596137 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001860544 |
Protein GI | 186473202 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.122442 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACG CCGTCATCGA CGCGCCCAGC GTTTCTCTGC GCCGTTATGG CGCGGTGGAG GCGTCGGACG TGCACGACTT TGACCAGATC GTGCTCGGTC TCGATGGGTC GATGGTGATG GCCGTGGACG GCATCGCGCA CGAAATCGAC CGGACGGCCG CGTGGCTCAT TCCAGCCGGT TCGCGGCACG ACTATGCGGG CGTCGGCGAG AACCGGCAGC TCGTGCTCGA CTTGCCCGCG TCTTCTGTCG CGGTGCCGCG GCGTTTGTTC GAACGGGCGC GCGCGGTCTC TATCGACGGG CCGCTGACGG GACTCGTTTC GCGTATCGCG AGCCGCGCGA CAGAGTATAG CGATGGCGAT GCCGCGTGGC GGCGCTTCAA CTGGGACGCG GCGGCAAGGT TGTGTGCTGC GATCGTCGAA GATATGGGCA CGGCGGATGC TGCGCCGGGC GCTGGTCTCG ATTTCGCGCG GATCGATGCA TGGTTGCGGG CGCATTTGTG TGAGCCGCTT CGCATTGCCG ATCTAGCTGC GCATTGCGGG TTCGGTATGC GGCGGTTTCA TCAACTGTTT GTCGAGGCGT TCGGTGAGAC GCCGCATCGG TATTTGCAGC GGCTGCGGCT CGATACTTCA GTGTCCTTGC TTGCGGATTC GGGCCGGTCT TTGACCGACG TTGCCCTCTC GGTCGGGTTT GGTGATCAGA GCGCTTTTAC GCATGCATTC ACGCGGCGCT TTGGGATGGC CCCGGGGCAA TGGAAGCAGA CGCGCTCGCG GTGA
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Protein sequence | MSHAVIDAPS VSLRRYGAVE ASDVHDFDQI VLGLDGSMVM AVDGIAHEID RTAAWLIPAG SRHDYAGVGE NRQLVLDLPA SSVAVPRRLF ERARAVSIDG PLTGLVSRIA SRATEYSDGD AAWRRFNWDA AARLCAAIVE DMGTADAAPG AGLDFARIDA WLRAHLCEPL RIADLAAHCG FGMRRFHQLF VEAFGETPHR YLQRLRLDTS VSLLADSGRS LTDVALSVGF GDQSAFTHAF TRRFGMAPGQ WKQTRSR
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