| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4253 |
|---|
| Symbol | |
|---|
| ID | 6245780 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 1245823 |
|---|
| End bp | 1247043 |
|---|
| Gene Length | 1221 bp |
|---|
| Protein Length | 406 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642596012 |
|---|
| Product | Serine--glyoxylate transaminase |
|---|
| Protein accession | YP_001860419 |
|---|
| Protein GI | 186473077 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0075] Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.340668 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGAAGC TCGACTTTCA TCCCGCAGGC CGCCACTTTT TGCAGATTCC CGGTCCGAGC
CCGGTGCCCG ACCGCATTTT GCGGGCGATG AGCTATCCGA CCATCGACCA TCGCGGCCCT
GAATTCGGCG CGCTAGGCCT GAAAGTGCTG AACGGCATCA AGAAGATCTT CAAGACGCAG
CAGCCGGTCG TGATCTATCC GGCGTCGGGC ACGGGTGCAT GGGAAGCCGC GCTGTCGAAC
ACGCTGAGCC CCGGCGATCA CGTGCTGATG TTCGAGACGG GACACTTTGC GACGCTGTGG
AAGAAGATGG CCGAGAACCT CGGCCTGAAG CCGGAGTTTC TCGGCTTGCC CGGCATCGAA
GGCTGGCGGC GCGGCGTACA GCCGCAAATG ATCGAAGCCC GTCTGCGCGA GGACACGCAG
CATGCGATCA AGGCCGTGTG CGTGGTGCAC AACGAAACCT CGACGGGCGT CACGTCGGAT
ATCGCCGCGG TGCGCCGCGC AATCGACGCG GCCAGTCATC CGGCGCTTCT GCTCGTCGAT
ACGATCTCGG GCCTCGCTTG TGCCGACTAT CGTCACGACG AATGGGGCGT GGACGTCACC
GTGTCGGGTT CGCAGAAGGG CTTGATGCTG CCGCCCGGCA TCAGCTTCAA CGCGGTATCG
CCGAAGGCGA TCGAAGCGGG CAAGCATGCG AAGCTTCCGC GCGCCTTCTG GGACTGGACT
GAAATCATCG AAATGAACAG GAGCGGCTAC TGGCCATACA CACCGAACAC GAATTTGCTG
TACGGGCTGT CGGAAGCGCT CGACATGATT CTCGGCGAAG GGCTCGACAA CGTGTTCGCA
CGTCACGACC GCCTTGCCGA AGCTTGCCGT CGCGCGGTGC GCGCGTGGGG TCTCGAGATT
CAGTGCGATG ACCCATCCGT GTTTAGCCCC GTGCTGACGG GCGTGATGAT GCCGGACGGG
ATCGATGCGG ACGCGGTGCG CAAGGTGATC TACGAACGCT TCGACATGTC GCTCGGCACG
GGCCTCGGCA AGATGAAAGG GCGCATGTTC CGCATCGGGC ATCTTGGCGA CTGCAACGAT
CTCACCCTGA TGGCAACGCT GGCGGGCGTC GAAATGGGTC TGCAAATAGC GGGTGTTCCC
GTTGCGGCGA GCGGCTTGCC CGTAGCGATG GAGTTCCTGA TGTCGCAGCC GAATACGCCG
AAGCTCAAAG CAGCCGCCTG A
|
|---|
| Protein sequence | MLKLDFHPAG RHFLQIPGPS PVPDRILRAM SYPTIDHRGP EFGALGLKVL NGIKKIFKTQ
QPVVIYPASG TGAWEAALSN TLSPGDHVLM FETGHFATLW KKMAENLGLK PEFLGLPGIE
GWRRGVQPQM IEARLREDTQ HAIKAVCVVH NETSTGVTSD IAAVRRAIDA ASHPALLLVD
TISGLACADY RHDEWGVDVT VSGSQKGLML PPGISFNAVS PKAIEAGKHA KLPRAFWDWT
EIIEMNRSGY WPYTPNTNLL YGLSEALDMI LGEGLDNVFA RHDRLAEACR RAVRAWGLEI
QCDDPSVFSP VLTGVMMPDG IDADAVRKVI YERFDMSLGT GLGKMKGRMF RIGHLGDCND
LTLMATLAGV EMGLQIAGVP VAASGLPVAM EFLMSQPNTP KLKAAA
|
|---|
| |