Gene Bphy_4249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_4249 
Symbol 
ID6245776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp1241338 
End bp1242531 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID642596008 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001860415 
Protein GI186473073 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGTC CATTGCAGGG TATTCGCGTC GTCGAAATCG GCACGCTGAT CGCGGCACCG 
TTTGCCGCGC GCCTGCTCGC TGAATTCGGC GCCGAAGTCA TCAAGATCGA AGCACCCGAA
ACGGGCGACC CGCTGCGCAA ATGGCGCAAG CTGCATGAAG GCACATCGCT CTGGTGGTAT
CTGCAATCGC GCAACAAGAA GTCGATCTGC GTGAATCTCA AGTCGCCGGA AGGCGCGGAC
GTCGTCAAGC GTCTGGCCGC CGACGCCGAC ATCGTCATCG AAAACCTGCG TCCCGGTGCG
CTCGAAAAGC TCGGCCTCGG CTGGGACGTG CTGCACGCGA TCAACCCCCA GCTCACGATG
GTCCGCATTT CCGGCTACGG GCAGACGGGC CCGTATCGCG ATCGTCCCGG CTTCGGCGCG
ATCGGCGAAG CGATGGGCGG CATCCGCTAC ACGACGGGCG ATGTCGATGG CGCGCCCGCG
CGTGTCGGTG TGAGCCTCGG CGATTCGCTC GCGTCGCTGC ATGGCGTGAT CGGTGCGTTG
ATGTCGGTGC TGCGCGTGAA GACAGGACAA GGCGACGGAC AGGTAGTGGA CGTATCGCTT
GTCGAAAGCG TGTTCAACCT GATGGAAAGT CTCGTGCCCG AGTACGATCT GCTCGGCCAC
GTGCGCGAGC GTAGCGGCGG CGCGCTGCCG GGCATCGCGC CGTCGAACAC GTATCGCACG
GAAGACGGCG GTTTCGTCGT GATAGCGGGC AATAGCGATC CGATCTTCAA GCGGCTGATG
CAGGTAATCG GCCGTCCCGA TCTCGCCGAC GATCCCACGC TTGCGCGCAA CGACGGCCGC
GTCGCGCAGA ACGCGATGCT CGATGCCGCA ATCACGGCAT GGACTTCGCA TCATTCGATC
GACGACGTGC TCGCCGCGCT CGAATGCGCC GGCGTGCCGT CAGGCCGCAT CTATTCGGTC
GCCGACATCG TTGCCGATCC GCATTATCAG GCGCGCGAGA TGTTGCTGAG GGCAGACTTG
CCGGGCGGTG CATCGGTGAA GATGCCGGGC ATCGTGCCGA AGCTGTCGGA GACGCCGGGC
GAAGTGCGCT GGCAAGGTCC CGCGCTCGGC GAGCATACGG CGAGCGTGCT TGCCGATCTC
GGCTATGAAC AGGACGAAAT CGAGCGGCTG CGCCGCGAAG GAGCCGTGCA ATGA
 
Protein sequence
MSGPLQGIRV VEIGTLIAAP FAARLLAEFG AEVIKIEAPE TGDPLRKWRK LHEGTSLWWY 
LQSRNKKSIC VNLKSPEGAD VVKRLAADAD IVIENLRPGA LEKLGLGWDV LHAINPQLTM
VRISGYGQTG PYRDRPGFGA IGEAMGGIRY TTGDVDGAPA RVGVSLGDSL ASLHGVIGAL
MSVLRVKTGQ GDGQVVDVSL VESVFNLMES LVPEYDLLGH VRERSGGALP GIAPSNTYRT
EDGGFVVIAG NSDPIFKRLM QVIGRPDLAD DPTLARNDGR VAQNAMLDAA ITAWTSHHSI
DDVLAALECA GVPSGRIYSV ADIVADPHYQ AREMLLRADL PGGASVKMPG IVPKLSETPG
EVRWQGPALG EHTASVLADL GYEQDEIERL RREGAVQ