| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4186 |
|---|
| Symbol | |
|---|
| ID | 6245714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 1174300 |
|---|
| End bp | 1174842 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642595946 |
|---|
| Product | CMP/dCMP deaminase zinc-binding |
|---|
| Protein accession | YP_001860353 |
|---|
| Protein GI | 186473011 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0590] Cytosine/adenosine deaminases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCCTGA CCATTCCATC GAAACAGAAC ACATCGGACT TCCCCGAGCA GGGGCTCGCG
CCGACGCGCG AACAGCTGGT CCGTCATCTG CGCCATGCGA GCATCGTCGC GGAGCGCGCG
ACGCTGATGG GGCACCACCC GTTCGGCGCG ATTCTCGTCG GCCCCGATCA GGAGTCGGTG
CTGATCGAGC AAGGCAACGT CGATACCGTC AATCACGCGG AATCGGTGCT CGCACGCATG
GCTGCCCTCA ATTTCACGCC GCAGTATCTA TGGAGCTGCA CGCTGTACAC GACGGTCGAG
CCCTGCTGCA TGTGCGCCGG CACGGCGTAT TGGGCGAACA TCGGGCGCGT GGTGTTCGGG
ATGACGGAAG AACGCCTGTT GCAGGCAACG GGCAATCATA CGGACAATCC GACGATGAGC
GTGCCGTCGC GGTACGTATT CGATCATTGT CAGAAGCAGG TCGATCTGAT CGGTCCTGTC
ACTGAAGTCG AAGCAGAAAT CATGCAGGTA CAACGCGCAT TTTGGGCCTC GCATTCAAGC
TGA
|
|---|
| Protein sequence | MSLTIPSKQN TSDFPEQGLA PTREQLVRHL RHASIVAERA TLMGHHPFGA ILVGPDQESV
LIEQGNVDTV NHAESVLARM AALNFTPQYL WSCTLYTTVE PCCMCAGTAY WANIGRVVFG
MTEERLLQAT GNHTDNPTMS VPSRYVFDHC QKQVDLIGPV TEVEAEIMQV QRAFWASHSS
|
|---|
| |