Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4174 |
Symbol | |
ID | 6245702 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 1163785 |
End bp | 1165086 |
Gene Length | 1302 bp |
Protein Length | 433 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642595934 |
Product | major facilitator transporter |
Protein accession | YP_001860341 |
Protein GI | 186472999 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACTCCC GCTTTGCCCG GCTCACGCGC ATTCATTCCT TCACGCCGCT TGCCAGCGCC ACGCTGATGC TGGGCGTCGC GATGTCGTTC ACCGCGCCCT ACCTGTCGCT GTTCGGCGTC GAGCAGGCGG GCATGTCGCC GCTGCAGCTC GGTCTGTTCA TGACGTTGAT CGCGGCGAGC GGCGTGGTCG CGAGCGCGTG GGCAGGCAAA TGGTCCGATA AGCATGGGCA TCATCGCGGA CTGCTGCTAG CGGCGTTGGT GGCCGCGGCG CTCGGCTTTT TGCTGCTTTG TTTCGTGCGC AACTATCCGG CGTTGCTCGC TATCGGCGTC GCGTTTCTCG GCGCGGGCGG CTCGGCGATG TCTCTGGTGT TTTCATTCGG ACGCGCGGCG CTGCCCGTGC ACGACGAAGC CGAGCGCTCG TTCGCGCTGG CGACGCTGCG CACGGTGCTG TCGATGGCAT GGGTGTTCGG GCCGTCCGTC GGCGCACTGG TGCTCGCGGG CGTGGGCTTT TACGGTCTCT TTCTGTTCGC CGCCGCGTGC TTTGCCGCGT GTGGCGTGAT CGTGTGGCGC ATGCGCCAGT CGCCCGCTGG CGATCCGCAC AGCGCGCCGG CGCATTATGC GGGCGACCCG GCGTCCTCGC TCGAAGTGAC CACCGTCACC GAACCCGCCG TACTTCCGCC GCCCGCACCA CCTCATGCGC CCGGCACGCA GCGGCAAATC TGGCGCTCCG TCGTCGCACT GACGCTGATT GGCCTGGCGG CCAATGCAAC GATGATCGTG CTGCCGCTTT ATGTCGTGCA CGGACTCAAG GGCACGCGGC TCGATGTCTC GATCATGCTC GGCCTCGGCG CGTTCCTGGA AATTCCAATG ATGCTCGCGC TCGGCGCACG CGGCTCGACG CTCAACAAGC TGAACTGGCT CGCTGCGTGC GCGGCTGTGC ATGTCGTGTA TTTCGTGGCC GTCGCGGCAT CGGGCACCGT CGACGTGCTG ATTCCGATGC AGGCCTTCAA TGCGTTCGTC GTGGCCGTGA CGTCGTGTCT CGGCATGACG TACATGCAGG ATCTGATGCC ACGTTCACCG GGCGCGGCGA CTGCGTTGTT CTTCAACGCG TCGCGTGTCG GCTCGATTCT CTCCGGTGTG CTGTCGGGCG TGCTGGTGGC AAGCCTCGGT TATCGCGGCA CGTTTCTCGT CTGCGGATGC CTCGCGCTCG GCGCGCTGAT CCTGTTCGCC GATCCGCCGT GGAAGCGCAT CGCGCTGCGC GTGCGCGACC AATGGGACGA CTGGCGCCAT CCGGCGCAGT GA
|
Protein sequence | MNSRFARLTR IHSFTPLASA TLMLGVAMSF TAPYLSLFGV EQAGMSPLQL GLFMTLIAAS GVVASAWAGK WSDKHGHHRG LLLAALVAAA LGFLLLCFVR NYPALLAIGV AFLGAGGSAM SLVFSFGRAA LPVHDEAERS FALATLRTVL SMAWVFGPSV GALVLAGVGF YGLFLFAAAC FAACGVIVWR MRQSPAGDPH SAPAHYAGDP ASSLEVTTVT EPAVLPPPAP PHAPGTQRQI WRSVVALTLI GLAANATMIV LPLYVVHGLK GTRLDVSIML GLGAFLEIPM MLALGARGST LNKLNWLAAC AAVHVVYFVA VAASGTVDVL IPMQAFNAFV VAVTSCLGMT YMQDLMPRSP GAATALFFNA SRVGSILSGV LSGVLVASLG YRGTFLVCGC LALGALILFA DPPWKRIALR VRDQWDDWRH PAQ
|
| |