Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4138 |
Symbol | |
ID | 6245666 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 1128112 |
End bp | 1129389 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642595898 |
Product | squalene-associated FAD-dependent desaturase |
Protein accession | YP_001860305 |
Protein GI | 186472963 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
TIGRFAM ID | [TIGR03467] squalene-associated FAD-dependent desaturase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAAGC TGGTTCACGT GATCGGCGCA GGGCTGGCCG GTCTCGCCGC CGCCGTGCAA CTGCAGCGGC GCGGCGCGCA GGTCGTGCTG TACGAAGCGG CCGAGCAGGC TGGTGGTCGC TGCCGCACGT ATTACGACCG CGCACTGGCG GCGACTGTCG ACAGCGGCAA CCATCTCGTG CTGTCGGGCC AGCAGGCCAC ATTGAACTAC GTTCGCGCCA TCGGTTCCGC TGAAGATCTC GTTGGGCCGA CGCAGCCCGA ATACCCGTTC GTCGACCTCG CGACGAACCA GCGCTGGGCC GTGCGGATGT CGCAAGGGCG ACTCCCGGCG TGGATCTTCG AGGCCGGCGC GCGCGTGCCG GACACGCAGT GGACGGACTA TCTGTCCGTC GTGCCGCTGC TGCTTGCCAA GCCGGGCCGC AACGTCGCGC AGACGATGCG CAGCAACGGC CCGCTATGGG ACCGCATGCT GCGCCCGCTG CTGCTGGCAA TGACGAACGT CGACCCGCGC CACGCGACGG CCGAACTCGC AGGCGCCGCA CTGCGCGACA CCTTCGTGAC AGGCGGCCCG GCCAGCCGCG CGCTTGTCGC GCGCAATGGA TTGGGCTCGG CATTCGTCGA CCCGGCGCTG CGGCTGTTGC AGCACGGGGG CGCGGCGATC CGGCTCGGCG CGCGGATCGA TGGACTCGAG TTCTCCGATG GCGACGACGG CCGGCGTGTC GCCTCGCTGC GGCTGAACGC GGAGGAGCGC ATCGAAATCG GCGCAAACGA AGCTGTCGTG CTGGCTGTGA CGCCCGATGT GGCGCAGTCG CTTGTGCCTG GCATGCAGGC GCCGCGCCGC TTTTCGGCGA TAGTGACGGC GCATTTTGCC GTCGAACCGC CGCTCGGCCA TCCGCCGCTG ATGGGGCTCG TCAACGCAAC CGCGAACTGG CTGGTAGCGT CGGACGGGCG TCTTTCGGTG ACGGTTTACG ATGCGGCGCG CCTCACCGAT ATGCCGCGTG ATGACCTCGC GCGCAAGCTG TGGGCCGACG TCGCGCAAGT GACAGGCTTG TCGGCCGACC TGCCGCTCAA GTGGCAATTG ATTGTCGAGC CGCGCGCCAC TTTCGCCGCG CAGCCCGACG AGGAGATGCG CCGCCCGGCC ACGCGCACTC GCTGGAACAA CCTGATGCTC GCAGGCGACT GGACGGCAAC CGGTCTGCCG CCGGGCATCG AAGGGGCGAT CCGCTCAGGC CAGAAGGCCG CGGATACGCT ATTGAACGAA CCGATGGAAC GCCGATGA
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Protein sequence | MRKLVHVIGA GLAGLAAAVQ LQRRGAQVVL YEAAEQAGGR CRTYYDRALA ATVDSGNHLV LSGQQATLNY VRAIGSAEDL VGPTQPEYPF VDLATNQRWA VRMSQGRLPA WIFEAGARVP DTQWTDYLSV VPLLLAKPGR NVAQTMRSNG PLWDRMLRPL LLAMTNVDPR HATAELAGAA LRDTFVTGGP ASRALVARNG LGSAFVDPAL RLLQHGGAAI RLGARIDGLE FSDGDDGRRV ASLRLNAEER IEIGANEAVV LAVTPDVAQS LVPGMQAPRR FSAIVTAHFA VEPPLGHPPL MGLVNATANW LVASDGRLSV TVYDAARLTD MPRDDLARKL WADVAQVTGL SADLPLKWQL IVEPRATFAA QPDEEMRRPA TRTRWNNLML AGDWTATGLP PGIEGAIRSG QKAADTLLNE PMERR
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