Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4137 |
Symbol | |
ID | 6245665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 1126082 |
End bp | 1128115 |
Gene Length | 2034 bp |
Protein Length | 677 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642595897 |
Product | squalene-hopene cyclase |
Protein accession | YP_001860304 |
Protein GI | 186472962 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1657] Squalene cyclase |
TIGRFAM ID | [TIGR01507] squalene-hopene cyclase [TIGR01787] squalene/oxidosqualene cyclases |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGATT TATCCATGAC CCAGACGCTG GGCGAAGTAC TGCCTCAAAC GCTGATCGAC GATCATGCTC CCGTTGCAGC CGCGCTGGCG ACGGGCGCCG CACCCGTCGA TGCGCTCGAC GCCGCCGTCA CGCGCGCCAC GGAGGCGATC CTTGCGGTGC AAAAAGACGA CGGCCACTGG GTCTACGAAC TCGAAGCCGA CGCGACGATT CCCGCCGAAT ACGTGCTGCT CGTCCACTTC CTGGGCGAAA CGCCGAACCT CGAACTCGAA CAGAAGATCG CGCGCTATCT GCGCCGCATC CAGTTGCCCA ACGGCGGCTG GCCGCTCTTC ACGGACGGCG CGATGGACGT CAGCGCGAGC GTCAAGGCGT ACTTCGCGCT GAAGATGATC GGCGATCCGG AAGACGCCGC GCACATGGTC CGCGCGCGCG AGTGCATTCT CGCGAACGGC GGCGCGGAAG CGGCGAACGT GTTCACGCGC ATCCTGCTCG CGCTATTCGG CGTGGTCACG TGGTACGCCG TGCCGATGAT GCCCGTCGAA ATCATGCTGC TGCCCAAGTG GTTCCCGTTC CACCTGTCCA AGGTGTCGTA TTGGGCGCGC ACGGTGATCG TGCCGCTGCT CGTGCTGAAC GCGAAACGGC CTGTCGCGCG CAATCCGCGC GGCGTGCGCA TCGACGAGCT GTTCCGCGGC GCGCCCGTCA CGACGGGTCT GCTGCCGCGC TCGGGTCACC AGAGCAAGAG CTGGTTCGCG TTCTTCCGCG CCGTCGACGG CGTGCTGCGC GTAACAGATG GCCTGTTCCC GAAAGCATCG CGCGAGCGCG CGATCAAGGC GGCCGTCAGC TTCGTCGATG AACGCCTGAA CGGCGTGGAC GGCCTCGGCG CGATTTTCCC GGCGATGGCG AACTCGGTGA TGATGTACGA CGTGCTCGGC TACCCCGCCG ACCACCCGAA TCGCGCGATC GCCCGCGAGT CGATCGAAAA ACTGCTCGTC GTCCACGAAG ACGAGGCGTA TTGCCAGCCG TGTCTGTCGC CCGTGTGGGA CACATCCCTT GCGGCGCACG CGCTGCTCGA AACGGGCGAC GCGCGCGCCG AAGAAGCCGC CGAACGCGGC CTCGCCTGGC TGCGTCCGCT ACAGATCCTC GATGTGCGCG GCGACTGGAT TTCGCGTCGT CCCGACGTGC GGCCGGGTGG CTGGGCGTTC CAGTACAACA ACGCACATTA CCCAGATGTC GACGATACGG CCGTCGTCGC GATGGCGATG CACCGTTCGG CGGCAGTCAC GAACTCGAAC GTCGATGCCA ACGCGATTGC GCGCGCCCGC GAATGGGTGG TCGGCATGCA AAGCAGCGAC GGCGGCTGGG GCGCGTTCGA GCCGGAAAAC ACGCAGTACT ACTTGAACAA TATCCCGTTC TCGGATCATG GAGCGCTGCT CGATCCGCCC ACGGCCGACG TGTCAGGCCG TTGCCTGTCG ATGCTCGCGC AACTCGGCGA GATGCCCGCG ACCAGTGAGC CCGCCCGCCG CGCATACGAC TATCTGCTGA AGGAGCAGGA AGACGACGGC AGCTGGTACG GCCGGTGGGG CATGAACTAC ATCTACGGCA CGTGGACGGC GCTGTGCGCG CTCAACGCAG CGGGCATCTC GCTCGAAGAC GCGCGCATCA AGCGCGCCGC GCAGTGGCTG GTGTCGATCC AGAACGCGGA CGGCGGCTGG GGTGAAGACG GCACGAGCTA CAAGCTCGAC TATCGCGGCT ACGAAAAGGC GCCGAGTATT CCGTCGCAAA CCGCTTGGGC GCTGCTGGGC CTGATGGCGG CCGGTTACGT CGATCATCCC GCCGTCGCGC GCGGTATCGA CTATCTGCAA CGGGAACAGC GCGACCACGG GCTGTGGGAC GAAGAGCGCT TTTCGGCGAC GGGCTTCCCG CGCGTCTTCT ATCTGCGCTA CCACGGTTAT CGCAAGTACT TCCCGCTGTG GGCGCTTGCG CGCTACCGCA ACCTGAAGCG CACGGGCGAA AAGCGCGTCA CCGTCGGCAT GTAA
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Protein sequence | MNDLSMTQTL GEVLPQTLID DHAPVAAALA TGAAPVDALD AAVTRATEAI LAVQKDDGHW VYELEADATI PAEYVLLVHF LGETPNLELE QKIARYLRRI QLPNGGWPLF TDGAMDVSAS VKAYFALKMI GDPEDAAHMV RARECILANG GAEAANVFTR ILLALFGVVT WYAVPMMPVE IMLLPKWFPF HLSKVSYWAR TVIVPLLVLN AKRPVARNPR GVRIDELFRG APVTTGLLPR SGHQSKSWFA FFRAVDGVLR VTDGLFPKAS RERAIKAAVS FVDERLNGVD GLGAIFPAMA NSVMMYDVLG YPADHPNRAI ARESIEKLLV VHEDEAYCQP CLSPVWDTSL AAHALLETGD ARAEEAAERG LAWLRPLQIL DVRGDWISRR PDVRPGGWAF QYNNAHYPDV DDTAVVAMAM HRSAAVTNSN VDANAIARAR EWVVGMQSSD GGWGAFEPEN TQYYLNNIPF SDHGALLDPP TADVSGRCLS MLAQLGEMPA TSEPARRAYD YLLKEQEDDG SWYGRWGMNY IYGTWTALCA LNAAGISLED ARIKRAAQWL VSIQNADGGW GEDGTSYKLD YRGYEKAPSI PSQTAWALLG LMAAGYVDHP AVARGIDYLQ REQRDHGLWD EERFSATGFP RVFYLRYHGY RKYFPLWALA RYRNLKRTGE KRVTVGM
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