Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4056 |
Symbol | |
ID | 6245586 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 1051184 |
End bp | 1051957 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642595818 |
Product | short chain dehydrogenase |
Protein accession | YP_001860225 |
Protein GI | 186472883 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGCGTG TCGTGCTGGT GACGGGAGCA TGCGGCGGGA TCGGCAGCGT GTTGTGCCGG CGTTTCGTCG AGGACGGTGC GACGGTGCTC GCGCTCGATG TCGATACGGC GGCGCTCGAT CAGCTGGTTG CGGAACTGGG CGCTGCGAAC GTGACGCCTG TCGCTGTCGA TCTGGCCGAC GCCGATAACG TGCGCGACCG CGTCGCGCAG GCGGTGGCTG CACGCGGCCC CGTGGACGTG CTGGTGGCGA ACGCGGGTGC AGCTGAAGGC ATGACACTCG CGAAGACGGA CGCCGCGAGC TGGCAACGCG ATGTGCACCT GAACCTGAAC GGCGCATACC ACACGGTGGA GGCGGTGCGT GCGTCGATGA TCGCGCGCCA GACGGGATCG ATTGTGCTGA TCGGCTCGGT GAACGGCATG ACGGCGCTCG GCCATCCCGC GTACAGCGCT GCCAAGGCGG GACTCATCAG CTATACGAAG TCGCTCGCGA TCGAGCTTGG CCGCTATGGC ATACGCGCGA ACATCGTGTG TCCGGGGACG GTGAAGACGA AGGCGTGGCA GGCGCGCGTC GACAAGAACC CGCAAGTCTT CGAAGATCTC CGGAAGTGGT ACCCGCTGCG CGACTTCGCG ACCCCCGACG ATATCGCCGA CGCCGTGCTC TTTCTCGCAT CGCCGATGGC GCGCGTGATC ACGGGTGTCG TGCTGCCCGT CGATGGCGGC CTGATGGCAG GCAACCGGCT GATGGCGGAA GACCTGACGC TCGAATCGCT TTAG
|
Protein sequence | MKRVVLVTGA CGGIGSVLCR RFVEDGATVL ALDVDTAALD QLVAELGAAN VTPVAVDLAD ADNVRDRVAQ AVAARGPVDV LVANAGAAEG MTLAKTDAAS WQRDVHLNLN GAYHTVEAVR ASMIARQTGS IVLIGSVNGM TALGHPAYSA AKAGLISYTK SLAIELGRYG IRANIVCPGT VKTKAWQARV DKNPQVFEDL RKWYPLRDFA TPDDIADAVL FLASPMARVI TGVVLPVDGG LMAGNRLMAE DLTLESL
|
| |