| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_4047 |
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| Symbol | |
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| ID | 6245577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 1041315 |
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| End bp | 1042049 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642595809 |
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| Product | extracytoplasmic-function sigma-70 factor |
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| Protein accession | YP_001860216 |
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| Protein GI | 186472874 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.750975 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.908185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTGAAT CAGTGGGGAG CTTTGCGGCG CGGGTCGAAC GACATCCGGC GGCGTTCGCA
CCTGGCGCAC CGGACGACAT CGAATGCGAG CCGGCCCTAT GCGCTGCGCG CATGTCAGTA
GAGCCGCGCG CAGCGCGTTC CCGTAGCGAA GCCGGCTGCG AGGGATTGCT GCTCGATGTG
CTGATCGAGA ACCGGCGCGC GCTGATCCAG CTCGCGCGTT CGTTCATCGG ATGTTCGAGC
CGAGCCGAGG ACGTCGTGCA TGACGTTTTC ATCAAACTCG CGGGCTTTCC GAACCAGGAC
GACGTGCGTC AACCGCTCGC GTACGTCGCG CGCATGGTGC GCAACGCATC GATCGACGCG
TGCCGCCGCC AGTCCCTCGA AAACACGTGG CACACGTGCG AGGAAGACGG CCTCGACGTA
CCGTCGCCGG AACCCACGCC CGAGTCCGCG CTCGTGACGC GCGACACCTT GCGCCACGCA
TTCGATGCGC TCGCGCAATT GCCCGAGCGC ACGCGGAGTG CATTCGAGCG CGTGCGTCTG
CGCGAAGAAA CCTTGCAGGA AACGGCGCGC GCATTGAATG TTTCGCAGAC GCTCGTGCAC
TTCATGGTCC GCGACGCCGC GAAGCATTGT GCGGAGTGCA TGCACGCAGG CGCGAAAAAC
GTCGCGTATG CGAAGACGGC GGGACGCGCT AAAAAAACCT GCGCGTCGAA CGTCAAGCAG
ATGACGGCCT CGTAA
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| Protein sequence | MAESVGSFAA RVERHPAAFA PGAPDDIECE PALCAARMSV EPRAARSRSE AGCEGLLLDV
LIENRRALIQ LARSFIGCSS RAEDVVHDVF IKLAGFPNQD DVRQPLAYVA RMVRNASIDA
CRRQSLENTW HTCEEDGLDV PSPEPTPESA LVTRDTLRHA FDALAQLPER TRSAFERVRL
REETLQETAR ALNVSQTLVH FMVRDAAKHC AECMHAGAKN VAYAKTAGRA KKTCASNVKQ
MTAS
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