Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_4040 |
Symbol | |
ID | 6245570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | + |
Start bp | 1033185 |
End bp | 1034978 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642595802 |
Product | cyclic peptide transporter |
Protein accession | YP_001860209 |
Protein GI | 186472867 |
COG category | [P] Inorganic ion transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4615] ABC-type siderophore export system, fused ATPase and permease components |
TIGRFAM ID | [TIGR01194] cyclic peptide transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGTTT CCAACGCACC GCCCGCGAAT GGTTTGGATC GCCCGAACAA ACCCGCCACC CGTTTGCTGT TGTCGCTATT GCGGCGCTCG CGCGGCGCGC TCGCGCTCGC GCTGATCGCA TGCATTGCGA ATGGCGTGTC GAGCGTACTG CTCGTCGCGA CACTCAATCG CGCGTTGAGC GCGCCCGCCG CAGCGGATCT TCCGCTTGCG CTGCGGTTCG GGGCTTGCGC ACTGGTGGCA TTGATCGCGC GCATTGTGTC AGGCGTGCTG TTCGCCGGGC TGTCGCAGGA CACGATGGGC CACATGCGCG AGCATGCGGC CGCACGCGTC GCGGCAGCGG AACTGCGCGA CGTCGAACGC GTCGGCGCAG CACCCGTTCA ATCGGTCCTC ACCGACGATG CGACCAACGT GTCAATGCTC TTTTTCGCGT TGCCCAACAT CGTGATGCAC GGCTCGATCG TCGCGGGCTG TCTCGCCTAT CTCGCGCGCC TGTCCTGGCC CATATGCGTG CTGGCGCTCG CCGCGATCCT GATTGGGTCG CTCGGTTACC GCTACGGCGA CATTCGCGCG ATTGCATCGC TCGAAGCAGC GGGCCGCGCG CAGGACCGGC TGTTCGACTA TCTGGGCGCG CTGTTTGCGG GCGCGAAGGA ACTGAAGCTG CATCGGAAAC GCGCCCGCCA GTTCGTCGAC GGACAGCTCG GCGCCGCGAT CACCGAAGTG CGCGACCATC GACGCCGCGC GTTCGTTGCG TACGCGGCGG GCGTCGGCTG GATCATCTTT CTGTTCTACG TTTTTCTCGG CGCGGCGACC TTTGTGCCGT CGATCGGTGT GCATGCCGAC GCGCATGCGG CAGCCGGCTA TGTGATTGTG TTCCTGTTCA TGCTGGTGCC GCTCGACGGC CTGCTGAACA ATCTGCCGAC TGTCAATGCG GCGCGCGTGT CGCTGGAGCG CATCGAGCGG GTTCTCGCCG AGTTCGAAGA GCCGCATCGG GCAGCAGTGC CCGCAACGGC TTCGGGCGCT CCGTGCGCAA CCTTCCGCGC GCTCACGCTG CGCGGCATCA CGCATGCGTA TTTTCATGAA CGCGACGAGC GCATGTTCCG CATCGGGCCT ATCGATCTGA GCTTCAGACC AGGCGAGCTG GTGTTCATCG TCGGCGGCAA CGGCAGCGGA AAGACGACCC TTGCGAAAGT GTTGACGGGT CTCTACGAGC CGCAAGGCGG CGTGATCGAA GTGGACGGTT TGCCCGTTAC GCGCGACACC CGGCCCGCCT ATCGCGAGCG CTTCTCGACG GTGTTCAACG ATTTCCATCT GTTCGATACG CTGCTGGGCA TCGTCGATCC CGACGACACG AACGCCGCTG CCCGCGCCGC CGCCGATGCG CGCGCCAATG CGTTGCTCGC AAAGCTCGCG CTCGATCACA AGGTGCGCGT GGAAAACGGC ACGTTCTCGA CGCGCGCATT GTCGACGGGT CAGCGCAAGC GTCTTGCCCT CGTCGTCGCT TATCTGGAAG ATCGTCCGTT CTATCTGTTC GACGAATGGG CCGCGGATCA GGATCCTTCG TTCAAGGCGG TGTTCTACGA GCAATTGCTG CCGGAGTTGC GCGCGCGTGG CAAGACAGTC GTCGTGATTA CGCATGACGA CCGCTACTTC CCGGTCGCGG ACCGCGTGCT CAAGCTCGAC AATGGCGCGA TCGTCAACGA AACGCGCGGC GTGCAGCATG CGGTTGCGGG ACACAGCGCA GCGCGCGCGA CGATGCATGC AGACGTGCAA CAGCCGAAGC GGGACGCGAG CTGA
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Protein sequence | MTVSNAPPAN GLDRPNKPAT RLLLSLLRRS RGALALALIA CIANGVSSVL LVATLNRALS APAAADLPLA LRFGACALVA LIARIVSGVL FAGLSQDTMG HMREHAAARV AAAELRDVER VGAAPVQSVL TDDATNVSML FFALPNIVMH GSIVAGCLAY LARLSWPICV LALAAILIGS LGYRYGDIRA IASLEAAGRA QDRLFDYLGA LFAGAKELKL HRKRARQFVD GQLGAAITEV RDHRRRAFVA YAAGVGWIIF LFYVFLGAAT FVPSIGVHAD AHAAAGYVIV FLFMLVPLDG LLNNLPTVNA ARVSLERIER VLAEFEEPHR AAVPATASGA PCATFRALTL RGITHAYFHE RDERMFRIGP IDLSFRPGEL VFIVGGNGSG KTTLAKVLTG LYEPQGGVIE VDGLPVTRDT RPAYRERFST VFNDFHLFDT LLGIVDPDDT NAAARAAADA RANALLAKLA LDHKVRVENG TFSTRALSTG QRKRLALVVA YLEDRPFYLF DEWAADQDPS FKAVFYEQLL PELRARGKTV VVITHDDRYF PVADRVLKLD NGAIVNETRG VQHAVAGHSA ARATMHADVQ QPKRDAS
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