Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3887 |
Symbol | |
ID | 6245423 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 860666 |
End bp | 861793 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642595655 |
Product | 4-hydroxyphenylpyruvate dioxygenase |
Protein accession | YP_001860062 |
Protein GI | 186472720 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins |
TIGRFAM ID | [TIGR01263] 4-hydroxyphenylpyruvate dioxygenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAGCG ACCTGCCGAC CCCCAACGAC GCGCTCAAGG CCGTCGCGGA CCCGGAGCAC AACCCGCTCG GCACAGCCGG CATCGAGTTC GTCGAATTCG CGGCGCGTCA CCCGCAGATG CTGGCGGAGA CGTTCGTGAA GCTCGGCTTC AAGCCGATCG CGCGCCATAT CAGCAAGGAC GTGACGCTGT TCCGTCAGGC CGACATGAAT TTCCTGCTCA ATGCCGAGCC GGATTCGTTC GCCGAGCGTT ACGCGGAAGA ATATGGCGTG GGCATTTGCG CAATCGGCAT TCGCGTCGCC GATGCACAAC GCGCTTACGA TCGCGCCATC GAACTCGGCG CGTGGTCGTT CGAAGGCGAG CGCCTCGGCA AGGGCGAACT CGTGATCCCC GCCATTCAGG GCATCGGCGA CTCGCACATT TACTTCATCG ACCGCTGGCG CGGGCGCGGC GGCCAGAAGG GCGGCCTGGG CGACATCTCG ATCTTCGACA TCGACTTTCG TCCGATCGAA GTCAGCACCG CGCAAGCCGA TCTGAGCCAC GCGGGCACGG GTCTCGTCGC CGTCGATCAT CTGACGCAAA CGGTCGGCGC AGGCCGCATG CAGGAGTGGA TCGACTTCTA TCGCGAGCTG CTCAATTTCC GCGAGATTCA TGAACTGCAC GCGAATTGGC ATGTGTCGGC GGAATCGCGT GTGATGGTGT CGCCGTGCGG CGCGATCCGC ATTCCCCTCT ACGAGGAAGG CACGCGCCGC ACGAGCCTGA TGCACGAGTA TCTGCCCGAT CATCCCGGCG AAGGCGTGCA GCACATCGCG CTCGCGACCG ACGACATCTT CGCGTGCACC GATCAGCTGC TTGCCAACGG CATCGAACTG GTCGAGCCGC CGCCCGCGTA TTACGAGCAG ATCGACGCTC GCTTGCCGGG ACATGGGCTC GATATCGAGC GCCTGAAGCG CGGACGGATT CTCGTGGACG GCGAGATCGG CGCAGACGGC GTGCCGCTTC TGTTTTTCCA GACCTTTGTG CTGCGACGAG AAGGGGACAT CTTCTTCGAG ATCGTGCAGC GCGAGGGTCA TCACGGTTTC GGCGAGGGCA ATCTCAGCGC ACTGGCGCAG GCGCGCTCGG CCGCATAA
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Protein sequence | MPSDLPTPND ALKAVADPEH NPLGTAGIEF VEFAARHPQM LAETFVKLGF KPIARHISKD VTLFRQADMN FLLNAEPDSF AERYAEEYGV GICAIGIRVA DAQRAYDRAI ELGAWSFEGE RLGKGELVIP AIQGIGDSHI YFIDRWRGRG GQKGGLGDIS IFDIDFRPIE VSTAQADLSH AGTGLVAVDH LTQTVGAGRM QEWIDFYREL LNFREIHELH ANWHVSAESR VMVSPCGAIR IPLYEEGTRR TSLMHEYLPD HPGEGVQHIA LATDDIFACT DQLLANGIEL VEPPPAYYEQ IDARLPGHGL DIERLKRGRI LVDGEIGADG VPLLFFQTFV LRREGDIFFE IVQREGHHGF GEGNLSALAQ ARSAA
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