| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3880 |
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| Symbol | |
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| ID | 6245416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 853689 |
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| End bp | 854843 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642595648 |
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| Product | porin |
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| Protein accession | YP_001860055 |
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| Protein GI | 186472713 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00909398 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA CTTTTATCGT CGCGGGCATT CTCGGCGCAT TCGCAGCATC GGCTCACGCG
CAAAGCAGCG TCACCTTGTA CGGCACGCTG GACGCCGGTC TCGTCTACAC GAACAACCAG
GCTGGCCACA GCAACTGGCA GCAAGGCAGC GGCACGGTGT CGGACACGTA CTTCGGCCTG
CGCGGCAGTG AAGACCTCGG TAACGGCCTG CACGCCATCT TCACGTTGGA GAACGGCTTC
AACCTCAACA ACGGCAGCCT CAAGGAAAGC AACACGCTGT TCAACCGTCA GGCGTACGTC
GGCCTGCAAA GCAACCAGTT CGGCACGCTG ACCCTCGGCC GTCAATATGA CTCGATGGTC
GACTATCTCG CGCCGCTGTC GGCAGCAGGT TCGGGCTACG GCAACAACCT GGCCGGGCAC
CCGTTCGACA ACGACAACCT CGACAACTCG TTCTCGATCA AGAACGCGGT CAAGTACACG
AGCGCGAACT ACGCGGGCCT GCAATTCGGC GGCCTGTACG GCTTCTCGAA CGAAGCGAAC
GGCTTTGCGG ACAACCGGGC ATGGAGCGCA GGCGCTTCGT ACAAGAACGG CCCGTTGAAC
GTCGCTGCTG CTTACCTGCA ACTGAACAAC GCGGGCAGCA ACAACACGGG CGGCGCGATC
TCGTCGGGCG CGAACGGCGC AGCGCAACTG GCCGCACAAA CGCAGCGCAC CTACGGCGTG
GGCGCGAACT ACACGTACGG TCCCGCGACC GTCGGCCTGC TCTGGACGCA CACGCAACTC
GACAACCTGC AAAGCGCGAA TGTCGGCGGC ACGTTCATCA ACGGCCTGTC GGGCACGAAC
CTGCACATGG ACAACTACGA AATCAACGGC CGCTACGCGT TGACGCCGGC GCTGGCCCTG
GCCGCTGCGT ACACGTTCAC GGACGGCAAG GTGTCGGGCT CGAACGGCGA CGGCTCGCCG
AAGTGGCACA CGGTTTCGCT GCAAGGCGAC TACTCGCTGA GCAAGCGCAC GGACGTCTAC
CTGGAAGGCG TCTATCAGCA CGCTTCGGGC GAACTCGGCA ACTTCGGTGC GAACGTGGCA
TCGATCAATA CGCTGACGCC GTCGTCGACG CAAAATCAGA CGGCTGTCGC AGTCGGCCTG
CGTCACCGCT TCTAA
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| Protein sequence | MKKTFIVAGI LGAFAASAHA QSSVTLYGTL DAGLVYTNNQ AGHSNWQQGS GTVSDTYFGL
RGSEDLGNGL HAIFTLENGF NLNNGSLKES NTLFNRQAYV GLQSNQFGTL TLGRQYDSMV
DYLAPLSAAG SGYGNNLAGH PFDNDNLDNS FSIKNAVKYT SANYAGLQFG GLYGFSNEAN
GFADNRAWSA GASYKNGPLN VAAAYLQLNN AGSNNTGGAI SSGANGAAQL AAQTQRTYGV
GANYTYGPAT VGLLWTHTQL DNLQSANVGG TFINGLSGTN LHMDNYEING RYALTPALAL
AAAYTFTDGK VSGSNGDGSP KWHTVSLQGD YSLSKRTDVY LEGVYQHASG ELGNFGANVA
SINTLTPSST QNQTAVAVGL RHRF
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