Gene Bphy_3872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3872 
Symbol 
ID6245410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010623 
Strand
Start bp846399 
End bp847388 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content67% 
IMG OID642595642 
Productmembrane protein 
Protein accessionYP_001860049 
Protein GI186472707 
COG category 
COG ID 
TIGRFAM ID[TIGR00374] conserved hypothetical protein
[TIGR03476] putative membrane protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.10202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCTGC TGACGATCGG CGGCGGGCTG TTCGTCGCGC TGCTCGCATG GCAGGGCTTC 
GGTTCGGTCG TGTCGACGCT GATGGCGGCG GGCTGGGGCC TTGCGATCGT CGCGGCGTTC
CATTTGCTGC CGCTTGTGCT CGATGCGGGC GCGATCTCGG TGATGTTCGA CCGCAAGCAG
AAGGAAGTGA CCGAACGTGA CGCGGTGTTC GCGCGCTGGA TCGGCGAATC GGTGAATAGC
CTGTTGCCCG CCGGTCAGAT CGGCGGACCC GTGATGATGG TGCGGCAGCT GTCGCAGCGC
GGCCTGCGCA TGCGCGACGC GGCCGCGGCG ATCACCGTCA GCACGACATT GCAAGCGCTC
GCGCAGATAG TCTTCGCGAT GCTCGGGCTG CTGCTGTTCG GTGCGTCGGC CGCACACGGC
GCAATGCAGG ATCTGCAGAC GGCGGCGCTG ATCGCAACGG GCGTGCTCGG CGCGATGATC
GTCGGCTTCT ATATCGCACA GCGTCGCGGC CTGTTCGGCA AGGCGTTGCG TGTCGTGTCG
AAGGTATTCG GCAAGCGCGA CTGGTCGGCG CTGACCACGC GCGCCGATGC CGTCGACGTG
GCCGTGCGCG AACTATACGA TCAGCGGGGC AAGGTCGCCG CGAGTTTCGC CTTCAGCCTT
GCAGGCTGGA TCGTCGGAAC GGTGGAGGTG TGGCTCGCGC TGCGCTTCCT CGGCCATCCC
GTCGGCTGGA TCGACGCGCT GCTGCTTGAA AGCCTCGGGC AGGCGATTCG CGGCGCGGCT
TTCGCGATTC CCGGCTCGCT CGGCGTCCAG GAAGGCGGCT ATCTGCTGCT GGCGCCTCTC
GTTGGCCTGC CGCCGGAAGC GGCGCTGGCG CTGTCGCTGG TGAAGCGCGC GCGAGAGCTG
CTGCTGGGCT TGCCGGGCCT GCTTTATCTG CACTTCAGCG AACGTAGCTG GCAGCGGCGG
CGCGCAACGC GTCTGCCCGC TGTCGATTGA
 
Protein sequence
MILLTIGGGL FVALLAWQGF GSVVSTLMAA GWGLAIVAAF HLLPLVLDAG AISVMFDRKQ 
KEVTERDAVF ARWIGESVNS LLPAGQIGGP VMMVRQLSQR GLRMRDAAAA ITVSTTLQAL
AQIVFAMLGL LLFGASAAHG AMQDLQTAAL IATGVLGAMI VGFYIAQRRG LFGKALRVVS
KVFGKRDWSA LTTRADAVDV AVRELYDQRG KVAASFAFSL AGWIVGTVEV WLALRFLGHP
VGWIDALLLE SLGQAIRGAA FAIPGSLGVQ EGGYLLLAPL VGLPPEAALA LSLVKRAREL
LLGLPGLLYL HFSERSWQRR RATRLPAVD