| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3780 |
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| Symbol | |
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| ID | 6245318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | + |
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| Start bp | 741388 |
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| End bp | 742170 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642595550 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001859957 |
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| Protein GI | 186472615 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.219824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAAAC TGCTTGCAGC TTTGACGGTT GCCCTGCTCG CTACCGTATC GATCGGCGCA
CACGCCAAAG ACTGGACCAC CATTCGTTTC GGCGTCGACG CCAGCTATCC GCCGTTTGAA
TCGAAAGGCT CCGACGGCAA GCTGACCGGC TTCGATATCG ACATCGGCAA CGAAATCTGT
GCACGCCTGA AGGCGAAGTG CGTGTGGGTC GAGAACGACT TCGACGGCAT GATCCCGGCA
CTCAAGGCGA AGAAGTTCGA CGGCGTGCTG TCGTCGATGT CGATGACGCC GCAACGCGCT
GAACAGATCG CCTTCTCGTC GAAGCTGTTC AACACGCCGA CGCGCCTCGT TGCCAAGAAG
GGCTCGAACA TCCTGCCGAC GGCGGAATCG CTGTCGGGCA AGTCGGTCGG CGTCGAGCAA
GGCACGATCC AGGAAACGTA CGCAAAGACC TACTGGGAGC CAAAGGGCGC GAAGGTCGTG
CCGTACCAGA ACCAGGACCA GGTCTATGCC GACCTGATCT CGGGCCGTCT GGACGCAGCA
CTGCAAGATG CTGTGCAGGC TGACATCGGC TTCCTGAAGA CGCCGCGCGG CGCGGGCTAC
CAGTTCGTCG GCAAGGATCT CGAAGACAAG AAGATTCTCG GCGAAGGCGC GGGCATCGGC
ATGCGCAAGG AAGACACCGA CCTGAAGGCG AAGATCGACA AGGCAATCGC CGACATCATC
AAGGACGGCA CATACAAGAA GATCGAGAAG AAGTACTTCG ACTTCGACGT GTACGGCGGC
TAA
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| Protein sequence | MKKLLAALTV ALLATVSIGA HAKDWTTIRF GVDASYPPFE SKGSDGKLTG FDIDIGNEIC
ARLKAKCVWV ENDFDGMIPA LKAKKFDGVL SSMSMTPQRA EQIAFSSKLF NTPTRLVAKK
GSNILPTAES LSGKSVGVEQ GTIQETYAKT YWEPKGAKVV PYQNQDQVYA DLISGRLDAA
LQDAVQADIG FLKTPRGAGY QFVGKDLEDK KILGEGAGIG MRKEDTDLKA KIDKAIADII
KDGTYKKIEK KYFDFDVYGG
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