| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3683 |
|---|
| Symbol | |
|---|
| ID | 6245225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | + |
|---|
| Start bp | 629458 |
|---|
| End bp | 630612 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642595453 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001859864 |
|---|
| Protein GI | 186472522 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 0.685138 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCGCG ATCAGGAAAC ACTGTCCATT CTTCTCGATT CGTTATCGCG CTTCGTGCGC
GAGCGTCTCG TGCCCGCCGA AAACGAAGTC GCCGAAACGG ATGAAATCCC TGCCGATATC
GTCGGCGACA TGCGCGAACT CGGACTCTTC GGCCTGTCGA TTCCCGAGGA ATACGGCGGC
CTCGGTCTGA CGATGGAAGA GGAAGTGCTC GCCGCGTTCG AGATCGCGAA AGCTTCGCCC
GCATTCCGGT CGCTGATCGG CACGAATAAC GGCATCGGTT CGCAAGGACT CGTCATCGAC
GGCACGGACG AGCAGAAGCA ATACTATCTG CCGAAGCTCG CATCGGGTGA GCTGATCGCG
TCGTTCGCAC TGACGGAGCC GGGTTCGGGC TCGGACGCCG CTTCGCTGCG CACGACCGCC
CTGCGCGATG GTGACCATTA CGTGATCAAT GGCACCAAGC GTTTCATTAC CAATGCACCC
GAAGCCGGCA TCTATACGGT GATGGCGCGC ACCAGCCCGG ACAGCAAGGG TGCGGGCGGC
ATCTCTGCGT TCATCGTCGA AAAAGGCACG CCAGGCCTGT CGCTGGGCAA GATCGACAAG
AAGATGGGCC AGAAAGGCGC GCACACCTGC GACGTGATCT TCGAGAACTG CCGCGTGCCT
GCGTCGAACA TGATCGGTGG CAAGGAAGGC GTCGGCTTCA AGACGGCCAT GAAAGTCCTC
GACAAGGGCC GCCTGCATAT CTCCGCGATC TGCGTCGGCG CGGCCGAGCG CATGCTCGAT
GACGCGCTGC GCTATGCAAT GGAGCGCAAG CAGTTCGGCC AGCCCATTGC CGAGTTTCAG
CTGGTGCAGG CGATGCTCGC TGACAGCCGC GCGGAAATCT ACGCCGCGCG TTCGATGGTG
CTCGACGCCG CGCGCCGCCG CGACGAGAAA CACGACGTAT CGACGGAAGC ATCGTGCTGC
AAGCTGTTCG CGTCGGAGAT GTGCGGGCGC GTCGCCGATC GCGCGGTGCA GATTCATGGC
GGCGCAGGAT ATGTGTCCGA CTATGCCGTC GAACGCTTCT ATCGCGACGT GCGCCTGTTC
CGCATTTACG AAGGCACGAC GCAGATCCAG CAACTGGTGA TCGCACGCAA CATGATTCGC
GACGCAAGCC GCTAA
|
|---|
| Protein sequence | MIRDQETLSI LLDSLSRFVR ERLVPAENEV AETDEIPADI VGDMRELGLF GLSIPEEYGG
LGLTMEEEVL AAFEIAKASP AFRSLIGTNN GIGSQGLVID GTDEQKQYYL PKLASGELIA
SFALTEPGSG SDAASLRTTA LRDGDHYVIN GTKRFITNAP EAGIYTVMAR TSPDSKGAGG
ISAFIVEKGT PGLSLGKIDK KMGQKGAHTC DVIFENCRVP ASNMIGGKEG VGFKTAMKVL
DKGRLHISAI CVGAAERMLD DALRYAMERK QFGQPIAEFQ LVQAMLADSR AEIYAARSMV
LDAARRRDEK HDVSTEASCC KLFASEMCGR VADRAVQIHG GAGYVSDYAV ERFYRDVRLF
RIYEGTTQIQ QLVIARNMIR DASR
|
|---|
| |