| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3599 |
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| Symbol | |
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| ID | 6245145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 545768 |
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| End bp | 548602 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642595372 |
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| Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
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| Protein accession | YP_001859784 |
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| Protein GI | 186472442 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.477673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.896375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGAATG CCGATCTGTC GGCAGACGGT ACGCAAGCGC AGTTGATCGA CCAGGCGGCG
CACGCGGCCG AGGCAGCCGG CGCGCCTTGG GCGTGGTACC GGGCGGGCCA GCATCTGGAA
CTCGTACGCG AAGGCGCGGC GCGGTTCGAC TGGCCGCGCT CCATCGTGCC CGCGATGCTG
CACGACGCCT GCGTCGAGTA CGGCTGGTTC GCGTGGCCGA CTGGCCGCAG GGATCTCGCG
CTCGGCTGGC TGCTTGCGCC CGCGTCGTGC GCGGGCGACT CCGCATTTGC CGCGTTCGCG
CGCGTGATCG GCGAACAAAT GCAGGCCGAT GCACTGATGC GCGCGCAAAA CGTGCAGCGC
GTGCTGTACG ACATCGCGTA TCTCGCCAGC TCGATCAGCG AGCGCGGCGA ATTTCTGCAG
GCGATTCACG AGCGTCTCGG TACGCTGATC GACGCTGAGA ATTTCTATCT CGCACTTTAC
GACCGTGAAA CGGGCGCCGT CACCTATCCG TACTACATTG ACCTGATCGA TACCGAAGCC
GTCGATACGA ACCACATGGA CATGGTCGAC CGGGAGCGGC TCTCGCTGAC GGGTTACGTG
CTGACGACGG GGCAGCCGCT GCTGATCGAC GAGAAGGGCA TCATCGAGGC AAGTGCGAGG
GGGCGCTTTC ATTGTGTCGG GCATCGGCCG AAGTTCTGGA TGGGCGCGCC GCTGAAGAAT
GCGTCGGACG AAGTGTTCGG CATGGTGACG ATGCAGGTGT ACGACGCGAC GCGCATCTAT
AGCGCCGAGG ACCGTGCGCT CTTTCTGGTT GTTGCGCGGC ACGTGGCGAT GGCGCTCGAC
CGCATTCTGC ATCGCGTCGG GCTCGAAGCC GAGGTCGCGC GCCGAACGGC TGAGCTTTCG
CGTCTGAACG ACACGCTGCG CGCGGAGATA GCCGAGCGCG AGCGCGCGCA GCATTTACAG
GCGGCGCTGT TCGAAATCGC GGAGCTGTCG AGTCAGTCCG TCGAGATCGG CAAGTTCTTT
CGCAGTCTGC ACGAGATCGT CGGCGGGCTG CTGTACGCGA AGAACTTCTA CGTTGCGCTG
TTCGATCCCG CGACGGCGGA GGTGTCGTTT CCGTATTACA TCGACGAAAC GCAGCAGGAA
GTGCCGACGT CGCGGCGCCG CGAGCGCGGA CTTACGGAGT ACGTGATCCG TCAGCGCGTG
CCGTGTCTGT TTGACACGAG CGATGCCGTG CGCCTTGTCG AAGCGGGCGA GATCAAGCTG
GACAGCGAGA ACATCCGTTT GCGCTCGTGG CTCGGCGTGC CGCTCTTCGA CGGCATCGTG
GTGCGCGGCG TGCTGGTCGT GCAGAGTTAT TCGTCGAGCG TGAATTACGA CAGGCGCGAT
CAGGAACTGC TGACATTCGT GTCGCGCCAT ATCGATACCG CGTTGTCGCG GCGGCGTGTC
GCGGAAGCGC AGCAGGCGGC GAATCTCGAA CTTGAAGCGC GAGTGCTGGC GCGCACGCAG
GAACTGGACG CCGCCAATGC GCGGCTCTTG CACGAGAACT ATCACGATGC GTTGACGGGC
TTGCCGAACC GTTCGCATCT GTACGAACGG CTGGCGGCGG CGTGGCTTGG CTACAGCAGC
CGCGGCGAGC CTCTTTCGGT GCTGTTCATC GACCTGGATC GCTTCAAGGT CGTCAACGAC
AGTCTCGGCC ATTTGTTCGG CGATGCGTTG CTCGTGGAAG TGGCGGGGCG CTTGCGCGAC
TGTTTGCGGC GAGACGATCT GCTTGCGCGG CTCGGCGGCG ACGAGTTCGC CGTCGTCGTG
CCGGGTGCGA GCTTGCAGAC GGTGCTAACG CTGGCGGAGC GCATTCTTGC GGCGTTCGAC
ACGCCGTTCA ATATCGGCGA GCAGACGGTG TTCACCTCAT GTAGCGTTGG TGTGGTGAGC
GCGGATAGTG CGCATCACCG GGAGCCGGCC GATTTGCTGC GCGATGCCGA TGCTGCGATG
TATCGCGTGA AGAATCGCGG GCGCGACAGT TTCGCGGTGT TCAATCAGCA GATGCGTCGC
GAGCTGTCGG ACCAGATCGA AACGGAGGGC GCGCTGCGCA ACGCGCTGAA GCGCGACGGC
GAGCTGGTGC CGTATTTTCA GCCTATTGTC GATATCGCCA GTGGCGAGCT GGTTGCGCTG
GAAGCGCTGA TTCGCTGGCA GCAGCCGAAC GGCGAGGTGT GGGCGCCGGG GCGTTTTCTG
CCTGCCGTGG AGGGATTAAA GCTGATTGGT CGGCTCGACA TGTACATGCT GACGCGCGTG
GCCGAGATTC TTGCGCAGCG GGAGCATATC GACTGGCCGC CCGTGCAGGT GAATCTGTCG
AGTTACAGCA TGACGCGTCC AGAGTTCGCG GAAGAGTTGC TCGAACTGTT GAAGCGCTAT
GGCGTGCATC CTTCGCGCGT TTCACTCGAA CTGACGGAGG GTGCGCTCGT TGCCGAGCCG
GATCTTGCGC GCAATACGAT GCAAAGTCTT GCCGATAACG GGATGAGTGT CGTGCTCGAC
GATTTCGGCA CGGGTTTTTC GTCGTTGAGC TATGTGCATC AGTATCGGTT CAGTGGCTTA
AAGATTGACA AGTCATTCGT GTTGGAGCTG ACGCAGAGTG CGCGGAGCCG GGCGATCGTG
CGGGCCATCG TGCGGATGGC GGAGTCGCTG GAGTTGACGG TTGTTGCGGA AGGGATCGAG
GATCAGGCGA CGTTGGATTT ATTGCGGACG ATCGGTGCTG CGCACGGGCA GGGGTATCAC
CTGGCGCGGC CGATGTCGCT GGAGGCGTTG ATGGGATCGG CGTCGGCGCC AAGGTTACGG
GTGTTGGCGC AATAG
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| Protein sequence | MWNADLSADG TQAQLIDQAA HAAEAAGAPW AWYRAGQHLE LVREGAARFD WPRSIVPAML
HDACVEYGWF AWPTGRRDLA LGWLLAPASC AGDSAFAAFA RVIGEQMQAD ALMRAQNVQR
VLYDIAYLAS SISERGEFLQ AIHERLGTLI DAENFYLALY DRETGAVTYP YYIDLIDTEA
VDTNHMDMVD RERLSLTGYV LTTGQPLLID EKGIIEASAR GRFHCVGHRP KFWMGAPLKN
ASDEVFGMVT MQVYDATRIY SAEDRALFLV VARHVAMALD RILHRVGLEA EVARRTAELS
RLNDTLRAEI AERERAQHLQ AALFEIAELS SQSVEIGKFF RSLHEIVGGL LYAKNFYVAL
FDPATAEVSF PYYIDETQQE VPTSRRRERG LTEYVIRQRV PCLFDTSDAV RLVEAGEIKL
DSENIRLRSW LGVPLFDGIV VRGVLVVQSY SSSVNYDRRD QELLTFVSRH IDTALSRRRV
AEAQQAANLE LEARVLARTQ ELDAANARLL HENYHDALTG LPNRSHLYER LAAAWLGYSS
RGEPLSVLFI DLDRFKVVND SLGHLFGDAL LVEVAGRLRD CLRRDDLLAR LGGDEFAVVV
PGASLQTVLT LAERILAAFD TPFNIGEQTV FTSCSVGVVS ADSAHHREPA DLLRDADAAM
YRVKNRGRDS FAVFNQQMRR ELSDQIETEG ALRNALKRDG ELVPYFQPIV DIASGELVAL
EALIRWQQPN GEVWAPGRFL PAVEGLKLIG RLDMYMLTRV AEILAQREHI DWPPVQVNLS
SYSMTRPEFA EELLELLKRY GVHPSRVSLE LTEGALVAEP DLARNTMQSL ADNGMSVVLD
DFGTGFSSLS YVHQYRFSGL KIDKSFVLEL TQSARSRAIV RAIVRMAESL ELTVVAEGIE
DQATLDLLRT IGAAHGQGYH LARPMSLEAL MGSASAPRLR VLAQ
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