| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3450 |
|---|
| Symbol | |
|---|
| ID | 6245010 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 371805 |
|---|
| End bp | 372977 |
|---|
| Gene Length | 1173 bp |
|---|
| Protein Length | 390 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642595237 |
|---|
| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
|---|
| Protein accession | YP_001859649 |
|---|
| Protein GI | 186472307 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCCC CAAAGGTGGT GGTCGAAGGT TTATGTAAGG TTTTCGGGCC GAACCCGAAA
CTGGCGCAAG ACATGCTCTC GCGAGGCGCA TCGAAGGACG AGGTGTTCGC CAAAACAGGG
CACGTGGTTG GCGTCCACAA CGTTTCCTTC GATGTGCAGG AAGGCGAGAT TTTCGTGCTG
ATGGGCCTGT CGGGCTCCGG CAAGTCGACG CTGATCCGTC TCATCAACCG GCTCGTCGAA
CCGACGGCCG GCAAGGTCAT TATCGACGGT CGCGACGTCG CGGCCATCAA GCGCTCCGAG
CTTACGTCGC TGCGACGCAC CGACATGAGC ATGGTGTTCC AGTCGTTCGC ACTGATGCCG
CAGCGTACCG TGTTGTCGAA TGCCGCGTTT GGTCTCGAAG TGGCGGGCGT GGGGCGCAAG
GAGCGCGAGA AGCGCGCGCT CGACGTCCTC GAGCAGGTGG GCCTCGCGAC CTTCGCGGGC
AAGCTGCCGG CGGAACTGTC GGGTGGCATG CAGCAGCGCG TGGGCCTGGC GCGCGCGCTG
GCCGTGAACC CGTCGCTGAT GATCATGGAC GAAGCGTTCT CCGCGCTCGA CCCGCTCAAG
CGCAAGGAAA TGCAGAACGT CCTGCTCGAA TTGCAGAAGA ACCAGCAGCG CACGATCCTG
TTCGTCTCGC ACGATCTGGA AGAGGCGCTG CGCATCGGCA GCCGCATTGC GATCATGGAG
GGCGGCCGCG TGGTGCAGAT CGGCACGCCG CAGGACATCA TCGCGAACCC CGCGGACGAC
TACGTGCGGG CGTTCTTCGA AGGCGTCGAC ACGAGCCGCT ATCTGACGGC GGGCGATCTG
ATGCAGGCGA ACGGTGTGCC CGTCGTGCGC AATCTGGATC ACGCGAGCGT CGCCGAGTCG
CTGAACGGTA GCGCCGAGTA TGCGTTCGTG CTCGACGGCG AGCGCCGTAT CCGCGGCTTC
GTGACGCGCG ATTCGATCGG CAGCGCGACG CCGTCGCTGA ACAAGGTGGA ATGCATTTCG
CGCGGCGCGC CGCTCGAACA TGTGGTGTCG CGTGTGTGCG CGAGCGCGAC GGCTCTACCC
GTGGTCGACG ATGAGGACCG CTACTGTGGT TCCGTCGATC AGGCCGCTGT CCTGAAGGTC
ATTACACGCA ACAGAGGTGC CGCCCATGTC TGA
|
|---|
| Protein sequence | MKSPKVVVEG LCKVFGPNPK LAQDMLSRGA SKDEVFAKTG HVVGVHNVSF DVQEGEIFVL
MGLSGSGKST LIRLINRLVE PTAGKVIIDG RDVAAIKRSE LTSLRRTDMS MVFQSFALMP
QRTVLSNAAF GLEVAGVGRK EREKRALDVL EQVGLATFAG KLPAELSGGM QQRVGLARAL
AVNPSLMIMD EAFSALDPLK RKEMQNVLLE LQKNQQRTIL FVSHDLEEAL RIGSRIAIME
GGRVVQIGTP QDIIANPADD YVRAFFEGVD TSRYLTAGDL MQANGVPVVR NLDHASVAES
LNGSAEYAFV LDGERRIRGF VTRDSIGSAT PSLNKVECIS RGAPLEHVVS RVCASATALP
VVDDEDRYCG SVDQAAVLKV ITRNRGAAHV
|
|---|
| |