| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3403 |
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| Symbol | |
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| ID | 6244964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 335679 |
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| End bp | 337427 |
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| Gene Length | 1749 bp |
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| Protein Length | 582 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642595191 |
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| Product | triple helix repeat-containing collagen |
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| Protein accession | YP_001859603 |
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| Protein GI | 186472261 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000154784 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCACGC CGACCGTCGA GATCATCGAT GTCGTGGCGA TCGACGCCGA ACGCATGACG
GTCGCCGTTA CCGTCGATAT CGAGCCCGAG GAAGTCGACA TCACTGACGT GGAAGCGGCG
AATGCCATCC TGATCGAGAT CATCGAGCAG TCCAACCGTT CAGGGCCGCC CGGCCCGATA
GGTCCGCAGG GTCCGGCCGG TCCGCAAGGT GTCCAGGGCA TTGCTGGCAA CGATGGCAAG
GATGGCGCGA CCGGCCCCGC CGGCGCGAGA GGTCCTGCAG GCCCGCAAGG CGACGCGGGT
CCGCAGGGTG TCGCCGGTCC TGCTGGCACA ACGGGTCCGC AGGGTGCGAC GGGGCCGGCC
GGACCCAGGG GCGATCCCGG CGTGGCCGGT CCGCAAGGCG CACAGGGTCT CAAGGGCGAT
CAGGGTCCGA AAGGCGATGC AGGTCCGCAA GGTCCGGCCG GTGCGACGGG CTCGCAGGGT
CCGGCCGGTG CGATGGGTCT CACGGGTCCG CAAGGAGCGA AAGGCGATCC CGGTCCCGTG
GGTCCGATGG GTCCCGAAGG CGACACGGGT CCGGCTGGCG ATCAGGGTCC GGAGGGAGAC
ACAGGCGCGC AGGGTCCGCA GGGTGCAACG GGTTCACAGG GACCCGCTGG TCCGGTCGGG
CAGACTGGCC CGCAGGGTGT CAAGGGCGAC ACCGGCGCGA CCGGCGAGCA GGGTCCGAAA
GGCGACACGG GTGCGCAAGG TCCGCAAGGC CCGGTTGGTC CAGCCGCCGA TACTTCGACC
TTCGTGCAGA AGTCCGGCGA CACGATGACG GGGCAATTGC GGATTGCGCC GGCGTCGGGT
GACGCGTCTC TATTGCTCAA TGCGCAGGGT TCAAACCTGC CCCGTATCTA TTTTCAGAAA
GGCGGGGCTG GCCCCAGCAT GCTCTACGAT GGTACGTCGA TAGGGTTTGC AAACGCCACG
CTCAACGCGT GGAATATGGC TATTAACGAC TCTGGCTCTG TCTCGTTTCG CAACACGGTC
AATATCAACA ACGGAACCGA CCTCTGGTTA AGCGCACAGT CCGGCAGCTA TAGCGGCAGG
CTCATGCTAA ACGCGAACGG CTACGCGCCG TTCCTTCGAT CCAACGGGGC CAACGGCAAT
ATTGAAGTTG TCAATTCGGC CAACAGCGCC GTTAACTTTA CGATCTGGGA TGACGGGCAC
GTAACCGCAC GCGGTAACGT CTACGCGTCG AGTGCTTTCC TGCAAACCAA TGGCGACGTT
AACGGCTCGC AATGGGTAGG CGGCTGGTTA AGTGCAGGCA TTAACAATAT CTGCATGACG
CGCACCACGG GCAACACGTA CAAAATCGGT TGGGATGGCG GCGCAGGCAA CCTCAACTTC
TATGTCGACG GCACATTTAT AGCGTATCTG CACAGCAACG CCTCGGACTC CGCGCTTAAA
GCCAACGTCG AGGAAGTTAC GCCCGACTCG CTTACCCTCA TTGAACAGAT AGACTTTTGC
AGTTACGACA TTGCCGGGCG GCATGTCGAC ATGGGCATCA TTGCGCAGCA GCTACAGACC
ATCACGCCGC GTTGGGCGTA TAAACCGCCG ACGCCTGATA CGCCCGAACC GTACTACGGC
GACCCGGAAC CGCAACCCTA TACCCCTTCG CCTCTGGCGT ATGACCGCGA CGCGCTGCTG
TTCGATGCGT TGCGCGCCGT GCAGCAGCTA TCGGCACGCG TGACACAGCT TGAGGCGATG
CGGCCATGA
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| Protein sequence | MSTPTVEIID VVAIDAERMT VAVTVDIEPE EVDITDVEAA NAILIEIIEQ SNRSGPPGPI
GPQGPAGPQG VQGIAGNDGK DGATGPAGAR GPAGPQGDAG PQGVAGPAGT TGPQGATGPA
GPRGDPGVAG PQGAQGLKGD QGPKGDAGPQ GPAGATGSQG PAGAMGLTGP QGAKGDPGPV
GPMGPEGDTG PAGDQGPEGD TGAQGPQGAT GSQGPAGPVG QTGPQGVKGD TGATGEQGPK
GDTGAQGPQG PVGPAADTST FVQKSGDTMT GQLRIAPASG DASLLLNAQG SNLPRIYFQK
GGAGPSMLYD GTSIGFANAT LNAWNMAIND SGSVSFRNTV NINNGTDLWL SAQSGSYSGR
LMLNANGYAP FLRSNGANGN IEVVNSANSA VNFTIWDDGH VTARGNVYAS SAFLQTNGDV
NGSQWVGGWL SAGINNICMT RTTGNTYKIG WDGGAGNLNF YVDGTFIAYL HSNASDSALK
ANVEEVTPDS LTLIEQIDFC SYDIAGRHVD MGIIAQQLQT ITPRWAYKPP TPDTPEPYYG
DPEPQPYTPS PLAYDRDALL FDALRAVQQL SARVTQLEAM RP
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