Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3362 |
Symbol | |
ID | 6244792 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010623 |
Strand | - |
Start bp | 300641 |
End bp | 301789 |
Gene Length | 1149 bp |
Protein Length | 382 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642595151 |
Product | secretion protein HlyD family protein |
Protein accession | YP_001859563 |
Protein GI | 186472221 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.347896 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000000000309797 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCAGCCA CCTTGCCTGT TGAGGAATCC GGGCGCGCCA CACGCGCGCA ACGGTCCGGA AAGAAGGGCG TTTTTCTCCT GATTGGCGGC GTCGCCGTGC TCGGCGCGAT TGCGTGGGGC GCGCACTGGT GGACGATGGG CCGCTTCATC GAAAGCACGG ACGACGCGTA TCTGCAGGCC GACGGCATGA CAGTCGCGCC GAAGGTGTCG GGCTATGTGG CCGAGGTGCT GGTCGGCGAC AACCAGCGCG TGACGAGCGG CCAGCCGCTG GTACGGCTCG ACAGCCGCCA GTACGACGCC GTGCTCGAAC AGGCGAACGC GACCATCGCT GCGCGCCGCG CCGACATTCT GCGCGGCGAA GCGGAACTCG CGCAGCAGCA GGCTGCCATT GCACAGGCCC GCGCGCAGCT CGACGGCGCG ACCGCGAACG AGGCGCATGC CGCCGATCAG GTCAAGCGCT ACGAGCCGCT TGCCGCGACG GGTGCCGAGA CGAACGAACG CGTCGCCGAC CTGCGCAACA CGCAGCGCCA GGCTAGTGCG ACGCGCGCAG CGGACGCCGC CGCGCTGCAA AGCGCCGAAC GCCAGATCGC GACGACACAT GCTGCGATCG AGCAGTCGCG TGCGCAACTG GCCGCCGCCG AAGCGAGCGC GCGCCAGGCG CAACTCGACG CGCAGGACAC GATGGTCAAG AGTCCGATCG ACGGCCGCGT CGGTGATCGC AGCGTGCGCG TCGGTCAGTA TGCACAGCCG GGCACGCGGT TCATGACGAT CGTGCCCGTG CAGGATGTCT ATCTCGTCGC GAACTTCAAG GAAACGCAGA TCGGCATGAT GCGTATCGGG CAACCGGTGA CGCTGCGCGT CGACGCGTTG CCGGGCGCGA AGCTGCACGG CACGATCGAC AGCTTCTCGC CGGGCACGGG CTCGCAGTTC GCGCTGCTGC CTGCGCAGAA CGCGACGGGC AACTTCACGA AAATTGTGCA GCGCGTGCCC GTGCGGATCA AGCTCGATGT CGGGCCGGAA ACGCGCAAGG TGCTGCTGCC GGGTTTGTCG GTGAACGTCG ACGTGGATAC GCGCAGCGCG CGCAACAACG AAGCGCGCAT CGAACGCGAG AACGAAGCGC ACGTCGCGCG AGAGAACAAC CGTGGCTGA
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Protein sequence | MSATLPVEES GRATRAQRSG KKGVFLLIGG VAVLGAIAWG AHWWTMGRFI ESTDDAYLQA DGMTVAPKVS GYVAEVLVGD NQRVTSGQPL VRLDSRQYDA VLEQANATIA ARRADILRGE AELAQQQAAI AQARAQLDGA TANEAHAADQ VKRYEPLAAT GAETNERVAD LRNTQRQASA TRAADAAALQ SAERQIATTH AAIEQSRAQL AAAEASARQA QLDAQDTMVK SPIDGRVGDR SVRVGQYAQP GTRFMTIVPV QDVYLVANFK ETQIGMMRIG QPVTLRVDAL PGAKLHGTID SFSPGTGSQF ALLPAQNATG NFTKIVQRVP VRIKLDVGPE TRKVLLPGLS VNVDVDTRSA RNNEARIERE NEAHVARENN RG
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