| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3361 |
|---|
| Symbol | |
|---|
| ID | 6244791 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010623 |
|---|
| Strand | - |
|---|
| Start bp | 299041 |
|---|
| End bp | 300648 |
|---|
| Gene Length | 1608 bp |
|---|
| Protein Length | 535 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642595150 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_001859562 |
|---|
| Protein GI | 186472220 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.182834 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.000000000000491163 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGAGC ACGCCGCCGT GCGGTCGAAG TCGCAAGGGC AAGAGCAAGC CGCGTCGGCC
AAACCCGCGA ACGCGAGCGC CGGCGACTGG ACGGCCGTCG CGGCCGGCGC GCTCGGCGCG
CTGATGGCGA CGCTCGACAT CTCGATCACG AACTCCGCGC TGCCGCAGAT TCAAGGGCAG
ATCGGCGCGA CGGGCACGGA GGGCACGTGG ATCTCGACGG GCTATCTGAT GTCCGAGATC
GTGATGATTC CGCTCGCTGC GTGGCTCACA CGCGTGTTTG GGCTGCGCAA TTTTCTGCTC
GGCAACGCGA CGCTCTTCAC GCTGTTCTCG CTCATGTGCG GGATGTCGCA TAGCCTGCCG
CAGATGATCG CCGGCCGGAT CGGCCAGGGC TTCGCGGGCG GCGCGATGAT TCCGACGGCA
CAGACCATCG TCGCGACGCG GCTGCCGCGC CATCAGATGC CGATCGGCAT GACGATGTTC
GGCCTGATCG TGCTGCTCGG GCCGTTGCTG GGTCCCGTGG TCGGCGGGTG GCTTGCGGAA
AACATCGACT GGAGCTGGTG CTTCTTTCTG AATCTGCCCG TGGGCGTGGC GCTCGTCGTG
CTGCTGGTCG CCGGGCTCGA CAGCGCGCGC ACGAACTGGC AGCAGTTCAT GCGCGCCGAC
TGGCTCGGCA TCGTCGGCAT GGCGGCGGGC CTCAGTTCGC TCACGGTCGT GCTCGAAGAA
GGGCAGCGCG AGCGCTGGTT CGAATCGTCG ATGATCGTGT GGCTGAGCGT GGTGGCCTTC
GTCGGTATCG CGTTGCTGAT TGCGGCGCAG TTCGCGTCGA AGCAACCTAT CGTGCGGCTG
AAGCTCCTGA CCAACGCGCG CTATTCGAGC GTCATCTTCA TTGTCTTCAC GGTCGGCGCC
GGCCTGTATT GCGTGTCGTA TCTGCTGCCG CAATTCCTGA GCGGCGTGGC GGGCTACAAC
GCGCAGCAGT CGGGTGCGGT CATGCTGATG TCGGGTTTGC CCGCGTTCCT GATGATGCCC
GTACTGCCGC GCCTGATGGG GCGCGTCGAT ACGCGTCTGC TCGTGGCGGC AGGCCTCGCG
TGTTTCGCGG GCAGTTGTCT GCTCGATATC GCGCTGACGG CGCAGAGCGC AGGCGACGAC
TTCACGTGGT CGCAACTGCT GCGCGGCGTC GGCCAGGTGC TCGCGATGAT GCCGCTGAAT
CAGGCATCGA TGGCAGCCGT GCCGCGCGAA CAGGCCGGCG ACGCGGCGGG CCTGTACAAC
ATGGCGCGCA ACCTGGGCGG CTCGGTGGGC CTCGCGTTGC TCGGTACGTT TATCGACCGG
CGCAATACGT TTCATGACGA CATGATCCGC GAGTCGGTGA CGGCGAATTC GCTGGTCGGC
GAGGAGCATG TCGCGCAGAG CGCGGCAGGC TTTTTCGCGC GGCACGGCGA CATGGCCTAC
GCGAAGATGC AGGCGCTCGG CCAGCTAGCG GCACAGATGC AGTTGCAGGC GAGTGTGATC
ACTTTTTCCG AGACGTTCTA TGTGCTCGCC GTCGCGCTGC TGTTGTGCAT TCCTCTCGCT
TTTCTTCTCA AGAAGCCGGC ACCGGGTACG CCGTCGGCCG GACACTGA
|
|---|
| Protein sequence | MAEHAAVRSK SQGQEQAASA KPANASAGDW TAVAAGALGA LMATLDISIT NSALPQIQGQ
IGATGTEGTW ISTGYLMSEI VMIPLAAWLT RVFGLRNFLL GNATLFTLFS LMCGMSHSLP
QMIAGRIGQG FAGGAMIPTA QTIVATRLPR HQMPIGMTMF GLIVLLGPLL GPVVGGWLAE
NIDWSWCFFL NLPVGVALVV LLVAGLDSAR TNWQQFMRAD WLGIVGMAAG LSSLTVVLEE
GQRERWFESS MIVWLSVVAF VGIALLIAAQ FASKQPIVRL KLLTNARYSS VIFIVFTVGA
GLYCVSYLLP QFLSGVAGYN AQQSGAVMLM SGLPAFLMMP VLPRLMGRVD TRLLVAAGLA
CFAGSCLLDI ALTAQSAGDD FTWSQLLRGV GQVLAMMPLN QASMAAVPRE QAGDAAGLYN
MARNLGGSVG LALLGTFIDR RNTFHDDMIR ESVTANSLVG EEHVAQSAAG FFARHGDMAY
AKMQALGQLA AQMQLQASVI TFSETFYVLA VALLLCIPLA FLLKKPAPGT PSAGH
|
|---|
| |