| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3360 |
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| Symbol | |
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| ID | 6244790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 297548 |
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| End bp | 299032 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642595149 |
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| Product | RND efflux system outer membrane lipoprotein |
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| Protein accession | YP_001859561 |
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| Protein GI | 186472219 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.414328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00000000121747 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTAT TTGATCTGGG CGGCGCCGCG CGCCGCCGTC GTTCGCATGT TGGCGCGATG
CTTGCGCCCG TCCCGGCTGC CGTGACCGTG CTGCTTGCAG GCTGCACGGT GGGTCCCGAC
TACAAGGGCG CGCCCGCCAC GACGCACGTG AGCAGCTTCA AGCGTGCGCC GGACGGCGTG
GTGCAGACGG CGCCCGGCGT CGCGGCATGG TGGCTCGCGC TCGGCGATCC GCAACTGACG
GCGCTGATCG ACGCGGGCAT CGCCAACAGC CCCGATCTGC GTGCCGCGCA GGCGCGCGTG
CGGCAGGCGC GCGCGGGCTT GTCCCAGCAG CAGAGCAACG AGCTGCCGAA GGTCGGCGCG
AGCGCGGCGT ATCTGCGCAC GCGCGAACCT GATCTGTCGT CGCTGAGCGG CGGTTCCAGC
TCGTCGGGCG GACGCGGACC CATTGCGCTG TATCTCGCGG GGTTCGACGC GAGCTGGGAA
CTCGATTTGT TCGGCGGCAC GCGCCGTGCG GTCGAAGCGG CCTCGGCGCA AGCAGATGCG
TCGCAGGCAG AACTCGCCGA CGCGCACGTG CAGCTCGCCG CGGAAATCGG CAGCGCTTAT
GTGGGCTTGC GCGATCAGCA GCAGAGCATG GCGATCGTGC GCAAGTCGGC GGAACTCGAA
GCGCGCGTGC TGACGCTGAC CGAGCAGCGG CGCGATCGCG GCGTCGCGTC GCAACTGGAT
GTGGAACGCG TGCGCACGCA GGTCGAAAAC ACGCGCAATG CGCTGATTCC CCTTGACGCG
CAGATCGCCG AATCGCTCGA TGAACTCGCC GTGCTGACAG GCCGCGAGCC GGGCGCGCTG
GACGACGAAC TGAACGCGTC GGCGCCACTG CCCGCGTTGC CACAGACGAT CGCCGTGGGC
GATCCCGCGC AACTGCTGAG GCGACGTCCC GATGTGCGCG CAGCGGAGCG GCGACTCGCG
TCGCAGAGCG CGCAGATCGG CGAGCGCGAA GCGGACTGGT TTCCCAAAGT GACCCTGTTC
GGCAGCCTGG CCTTCAGCGC CGCCGACCCC GGCCACCTGG TGCGCAAGAA TAATTTCACG
TGGCTCGCGG TGCCGTATCT GCAATGGAAT GCGTTCGACT TCGGCCGCAC GAAGGCACGT
GTCGATCAAT CGCGTGCCGC GCTCGACGAG GCGCAGGCCA AGTACGAAAG CACGGTGCTC
GGCGCGCTGC GCGATGCCGA TGTCGCGCTT TCGCGCTATG GTCATGAGCG TGAGAACGTC
GTCAGCCTGC GCACGGTCGA GTCGTCCGCG ACGCGCGCGG CGACGCTGAC GGAACAGCGC
TATCGCGCGG GCACGGCGAC GGCGCTCGAC TGGCTCGATG CAGAACGCAC GCGCTATACG
GCCGAACAGA ATCGCATCCA GAGCGATGCG CAACTGATCA AGGACTACGT CGCGTTGCAG
AAGAGCCTCG GGCTCGGGTG GGAAGGGATG GTGTCCACGC AATAG
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| Protein sequence | MKLFDLGGAA RRRRSHVGAM LAPVPAAVTV LLAGCTVGPD YKGAPATTHV SSFKRAPDGV
VQTAPGVAAW WLALGDPQLT ALIDAGIANS PDLRAAQARV RQARAGLSQQ QSNELPKVGA
SAAYLRTREP DLSSLSGGSS SSGGRGPIAL YLAGFDASWE LDLFGGTRRA VEAASAQADA
SQAELADAHV QLAAEIGSAY VGLRDQQQSM AIVRKSAELE ARVLTLTEQR RDRGVASQLD
VERVRTQVEN TRNALIPLDA QIAESLDELA VLTGREPGAL DDELNASAPL PALPQTIAVG
DPAQLLRRRP DVRAAERRLA SQSAQIGERE ADWFPKVTLF GSLAFSAADP GHLVRKNNFT
WLAVPYLQWN AFDFGRTKAR VDQSRAALDE AQAKYESTVL GALRDADVAL SRYGHERENV
VSLRTVESSA TRAATLTEQR YRAGTATALD WLDAERTRYT AEQNRIQSDA QLIKDYVALQ
KSLGLGWEGM VSTQ
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