| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3253 |
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| Symbol | |
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| ID | 6244686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 174462 |
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| End bp | 179090 |
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| Gene Length | 4629 bp |
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| Protein Length | 1542 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642595045 |
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| Product | cellulose synthase domain-containing protein |
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| Protein accession | YP_001859457 |
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| Protein GI | 186472115 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | [TIGR02996] repeat-companion domain TIGR02996 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.706167 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATCC GCCAACGCGC GCTTGTAATC GGCATCGCGC TCACGCTCGG CGCGGGCGCG
GCGGCGTCGG CATTCGCGCA GGGGCAGCCG AACGACCCGA TGAACGTGCT GATCGATCAG
GGCAAGTACT GGCAGGCTCA TCAGCGCGGC GACCTCGCCG AGCAAGCGTG GCTGAAGGTG
CTGCGCATCG ATCCGAAGCA GCCCGACGCG CTGTACGGCA TGGGCATCGT GATGTCCGAC
CGCAAGGACG GCGCGGGCGC GCAGCAATAC CTCGCGCGGC TTCGCCAGGC CGCGCCGAAC
TACCCGAACA TGGACGAACT CGCGCGGCGC CTCGGTCAGT CGAGTCCGAC CGATCAGGCC
GTCAACGACG CGCGGCGTCT CGCGCAGTCC GGTCAGCAGG CGTCGGCGGC CCAGGCTTAC
CGGCAGGCGC TGGGCACGAA GCCGGCCAAT CCGCAGCTCG CGCTCGAGTA CTATCAGGCG
CTCGGTTCCT CACCGCAGGG CTGGGAAGAG GCGCGTCGCG GGCTCGAACA GCTCGCGCGC
GAGCATCGCG ACGATCCGCG TTTCGCGCTC GCGTATGCAC GGCATCTGAC GTATCGCGAA
GCGAACCGGC GTGAGGGCAT CGAGCAGCTT GCGCAGTTGT CGAAAGATTC CATCGTCGGC
GCGCAGGCGA AAGCGGCGTG GCGCCAGGCG CTGCTATGGC TCGGCGTGCG CGCATCGGAT
GCGCCGCTGT TTCAGGCATA TTTGTCCGTC GCGCCCGACG ACGCCGCCGT CAAGGCCCGC
GCCGATTCGA TCTCGGAACA GGACCGCCGC GCGAGCGAGC GCGCGCAGCA GAACGCCGGT
GCAGACGCAC GCGGCCGCAC CGTCGCCGAA GGCTTCGCGG CGCTCGATCG CGGCGACCTC
GTGACGGCGA AGGCGCGCTT CTCGTCGGTA CTTGCAAGTT CTCCGAACGA CGGCGACGCG
CTCGGCGGCA TGGGCGTTGC GTTGCTCAAG CAGGAGCAGT TCGCGCAGGC GCGCGAGTAT
CTGCTGCGCG CGTCGCAGCA GGGCGGCGCG GCGCGCTGGC GCGAGGCGCT CAACAGCGCG
ACCTACTGGA TGTACACGAG CGAAGGCCTC GGCGAACAGA GCAACGGCAA TCTGGCGCAC
GCGAAGGCAT TGTTCGAAAA AGCGATTGCT GTCAGTCCCG GCGATGTCAC CGCGCAAACA
GCGCTCGGAG ATCTGCTGAT GCAAAGTGGC GACCCGCGCG GCGCGGAAGC GGCGTTCCGG
ATGGCGCTGC GCCGCCAGGC CGATAATCCC GATGCGATCC GCGGGCTCGT CGGCGCGCTC
GCCGCGCAAG GACGCGGCGA CGATGCGCTC AGCTTCGCGA ACCAGTTGAC GGAAGCGCAG
CGCAAGAAGG TTGGCGGCGC GGACCGTCTG CGTGGCGAAG CGCAGGCAGC ACAGGCGCGC
GCGGCCGAAG CGCGCGGCGA TCTCGGCAAT GCACGCAGCC TGTTCGAAGA TGCGCTGCTC
AGCAATCCTG ACGATCCGTG GCTGCGTCTG GATCTCGCGC GCATCTACGC GAAGCAGGGC
GCGTATGCAA ACGCGAAGAG CATCATGGAC GGGCTGATCG CGCTGCATCC GGACATGCCC
GACGCGTTCT ACGCGAGCGC CTTGCTGGCC GCGGACATGC AGGACTGGCG CTACGGTCTG
TCGCAACTCG AACGCATTCC CGTGAACAAG CGCACCGACG CGATGGCGTT GCTGCAACAC
CGGCTGTGGG TGCATCAACA GTGCGACGAA GCCGTAGCGC TCGCGAAGAG CGGACGCGTC
GCACAGGCGC GCGGGGTGCT GAACAACGCG GAACCCGTCG CGGGCAACCA TGCCGAGCTG
ATCGGCGCGA TCGCGTCGGC GTATGTGAAT ACGGGCGACA CGGCGCGTGC GCTGATGATG
GTGCGCGGTG CCGTCGCACG TTCGCCGAAC GACGCGGGAC TGCTGCTCAC CGACGCCGGC
ATTCTGCTGA ACGCCGGCCA GGATGCCGAA CTGGGCGAAG TGATGCGGCG CCTCGCGTCG
ATGCAACTGA CGGGGCAGCA GCGCAGCGAC TTCGAGAAGA TCAACGTGGC TATCGTTGTG
CGCCGCACGG ACGCGCTGCG TCAGGCCAAC GATCTGGCGA GCGCATTCGA CGTGCTGTCG
CCCTGGCTCG CGGCCCGCCC GAACGATCCC GACATTCTTG CGGCGCTCGC GCGCCTGTAC
ACCGCGAACA ACGACAACGC GAACGCACTC GCCACCTATC GCCTGGCGCT CGCGCAGAAT
CCAAACGACC TTGGCCTGCT GCTGAACGCG GCGGGCGCGG CGACGCAGAT CCGCAAATTC
GATTTCGCCG AGTCGAGCTT GCGGCACGCG TTGCGCATCG CGCCGAACAA TGCCGATGCG
CTTGCCGCAA TGGGCCGCAT GTATCGCGCG CAAGGCAGGA ACAGTCTGGC CGCGCAGTAT
TTCCAGCGCG CGCTGATTGC GCAGAACGCG CCGCTCGCGC GTCAGGGGAC GCAGCCGGCA
GGTGTGAACG GAACGCCCGT GCCGAGCGGC TGGGACGTGC CGCTGCCGCC AAGAGGTCCG
ATTCCGCTGC CGGGCACGAA CCCGTTTGCG AACCGGACGT CGGCGGATGC GTCGAACAGT
GTGCCGTTTC CTGCGCAGAA CACCCAACCG TATCTGATGC CCATGCCTGC CTATACTCCG
CCGACGCAGC CGGCGCCTTA CATCGCGCCG CAAACGCAAC CGGCTTCGCA AATCGATTCG
CTCGGCGTGC TCGCGCCGCA AGCGGCATCG AATGGACGGG AGGCGCCGGA TGTCGACGGC
TATGGTCCCG ATCAGTACGG CTCGTCGCAG TCGGGCGGCG GGCTCGCGCC GGGGCAGGCG
TATCCGGGGC AAGGGTACGC GCAGCCGCAG AGTTACCAGC AGCCGTATCC GCAGCAGGCG
TATCAGCAAC CGGTGTACGT GCAACCGAAC GATGCCGCAG TGAGCACGCC CTGGCCGATG
TCGCCGCAGG CGCAGGCCGC CGCACAGGCG CAGGCGACGC AGGGGATGAA TCAGCAACCG
ACGTCGGCGT CGAAGAAGCG CGCGGCGAAG AATGCCCGCG CGACGAACAG CAGCGCGGCA
TCTGCGCAGC AGCAGGGCTA TGCGCAACCG TACCCGCAGC AGCAGGCTTA CCCGCCGCCG
TATCCGCAGC AGCCCGCTTA CGCGCAGCAG CCGTATCCAC AGCAGCGCGC GTATGCACAA
CAGGCGTATC CCCAGCAGGG CTATCAGCCC CAACCGTATC AGCAACAGGC CTATCCGCAA
CAGGCGTATC CGCAGAACTA CACGAATCAG GGCTACGGCC TGGTGCCGTA CATTCCGCAA
CCGCCCGCGC CCTATCCGGC GCGCAACGCG CAGTTGCAGG ACGAACAGAA CCGGCAGTAT
CGGCAGCCTG CGCAGCCGCA GCCGCTGACC GTCGAAGAAG AGCTCGCGCA GATCAATCGC
GAGCAGACCA GCACGGTGAG CGGCGGCATC GTGTTTCGCA ACCGCGACGG CGAGAACGGC
CTGTCGAATC TGACCGACAT CGAAGCGCCG GTGCAAGGCC GCATTCGTGC GGGCGACGGC
CATGTGATCG TCGAGGTCAC GCCCGTGACG CTCGATGCGG GCACGGCGAG CAACAACACC
AACACGCTGG CGCGCTTCGG CTCGTCGCAG GCGTTCGGCA CCAGCACAGT GCTGCCCGGC
TCGCAGACGG CCAGCGGCGT GGGCGCGGAT GTCGGCTATG AGTGGCGCGG CCTGAAGGCC
GACGTCGGTG CTACGCCGTG GGGCTTTCGC GAGCAGAACA TCGTGGGCGG CGTGCAATAT
CGCGGCAATA TCACCGACAA GGTGTCATAC AAGCTGACGG CGGGACGCCG AGGGGTGACG
GACAGTTTGC TGTCGTATGC AGGTGCACAC GATTCGGCGA TGAATCTGCA ATGGGGCGGC
GTGACGTCGA ACGGTTTGCG CGGCGATGCC GGCTGGGACG ACGGCACGAA CGGCCTTTAC
GTGAACGCGT CGTGGGCCTA TCTGATGGGC CACAACGTCG CCTCGAACAA TGCGGTGAAG
GGCGGCGGCG GTGTCTATAC ACGACTCGTC AAAGACACGG ATCAGACGCT GACGGTCGGC
GTCAACACGA CGCTGATGCA CTACGACAAG AACCTGTCGT ACTTCACGTT CGGGCAGGGC
GGCTATTTCA GCCCGCAGCA GTATGCGATC CTGAATCTGC CCATCGAATA CACCGGGCGC
AACGGGCCGT TCACCTATGA CCTGAAAGCG TCGATCGGCG TGCAGCATTA TCGTCAGGAC
GAGTCCGATT ACTTCCCGAC CAACAGCACG TATCAGAGCA AGGCGGCGTC GGCTTCGAAC
GTGCCGGACC CGGGTGCTGT CTATCCCAGC CAGAGCAAGA CGGGTGTGTC GTATTCGATC
GATGCCGTCG GCGAATATCA GCTCGCGCCG CAACTCGCTG TGGGCGCGGC TGCATCGTTC
GGCAACGCGT ATCAGTATCG CGAGTTCGTC GCTGCCGTTT ACGTGCGCTA TGCGTTCACA
AAGCAGTCGG GCTCGAGCAC GTTCCCGCCG TCGCCTGTGC GTTCGTACTA TCTGCCCGTG
AACGAATAA
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| Protein sequence | MPIRQRALVI GIALTLGAGA AASAFAQGQP NDPMNVLIDQ GKYWQAHQRG DLAEQAWLKV
LRIDPKQPDA LYGMGIVMSD RKDGAGAQQY LARLRQAAPN YPNMDELARR LGQSSPTDQA
VNDARRLAQS GQQASAAQAY RQALGTKPAN PQLALEYYQA LGSSPQGWEE ARRGLEQLAR
EHRDDPRFAL AYARHLTYRE ANRREGIEQL AQLSKDSIVG AQAKAAWRQA LLWLGVRASD
APLFQAYLSV APDDAAVKAR ADSISEQDRR ASERAQQNAG ADARGRTVAE GFAALDRGDL
VTAKARFSSV LASSPNDGDA LGGMGVALLK QEQFAQAREY LLRASQQGGA ARWREALNSA
TYWMYTSEGL GEQSNGNLAH AKALFEKAIA VSPGDVTAQT ALGDLLMQSG DPRGAEAAFR
MALRRQADNP DAIRGLVGAL AAQGRGDDAL SFANQLTEAQ RKKVGGADRL RGEAQAAQAR
AAEARGDLGN ARSLFEDALL SNPDDPWLRL DLARIYAKQG AYANAKSIMD GLIALHPDMP
DAFYASALLA ADMQDWRYGL SQLERIPVNK RTDAMALLQH RLWVHQQCDE AVALAKSGRV
AQARGVLNNA EPVAGNHAEL IGAIASAYVN TGDTARALMM VRGAVARSPN DAGLLLTDAG
ILLNAGQDAE LGEVMRRLAS MQLTGQQRSD FEKINVAIVV RRTDALRQAN DLASAFDVLS
PWLAARPNDP DILAALARLY TANNDNANAL ATYRLALAQN PNDLGLLLNA AGAATQIRKF
DFAESSLRHA LRIAPNNADA LAAMGRMYRA QGRNSLAAQY FQRALIAQNA PLARQGTQPA
GVNGTPVPSG WDVPLPPRGP IPLPGTNPFA NRTSADASNS VPFPAQNTQP YLMPMPAYTP
PTQPAPYIAP QTQPASQIDS LGVLAPQAAS NGREAPDVDG YGPDQYGSSQ SGGGLAPGQA
YPGQGYAQPQ SYQQPYPQQA YQQPVYVQPN DAAVSTPWPM SPQAQAAAQA QATQGMNQQP
TSASKKRAAK NARATNSSAA SAQQQGYAQP YPQQQAYPPP YPQQPAYAQQ PYPQQRAYAQ
QAYPQQGYQP QPYQQQAYPQ QAYPQNYTNQ GYGLVPYIPQ PPAPYPARNA QLQDEQNRQY
RQPAQPQPLT VEEELAQINR EQTSTVSGGI VFRNRDGENG LSNLTDIEAP VQGRIRAGDG
HVIVEVTPVT LDAGTASNNT NTLARFGSSQ AFGTSTVLPG SQTASGVGAD VGYEWRGLKA
DVGATPWGFR EQNIVGGVQY RGNITDKVSY KLTAGRRGVT DSLLSYAGAH DSAMNLQWGG
VTSNGLRGDA GWDDGTNGLY VNASWAYLMG HNVASNNAVK GGGGVYTRLV KDTDQTLTVG
VNTTLMHYDK NLSYFTFGQG GYFSPQQYAI LNLPIEYTGR NGPFTYDLKA SIGVQHYRQD
ESDYFPTNST YQSKAASASN VPDPGAVYPS QSKTGVSYSI DAVGEYQLAP QLAVGAAASF
GNAYQYREFV AAVYVRYAFT KQSGSSTFPP SPVRSYYLPV NE
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