| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3196 |
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| Symbol | |
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| ID | 6244879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010623 |
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| Strand | - |
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| Start bp | 105992 |
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| End bp | 107077 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642594990 |
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| Product | outer membrane protein (porin) |
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| Protein accession | YP_001859402 |
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| Protein GI | 186472060 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00143868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA TAAGGAGTCT AAGTTTGATA TCGGTTTCTG CTTTGGTTGC CGGCAGTGCT
TGCGCTCAAA GCAACGTTAC GTTATACGGA ATCGTTGATA CAGGTGTGCA ATATTACAAC
AACGCCACAG CTTCAGGCGG ATCAGTCGTC GGAATGCCGA GCCTCTCAGG GAAACTGCCG
TCGCGTTTTG GTCTGCGGGG CGTAGAAGAT CTAGGCGGTG GGTATAAGGC GTTCTTCGTC
CTCGAAAATG GTTTTGCAGT GAACAACGGT GCGCTAGGGT ACGGTGGAAG AATATTCGGG
CGTGCCGCAA ACGTTGGAAT TGATAGCAGG TTCGGAACCT TGACGTTGGG CAGACAGATG
AACATGACGT TATACGCGCT TACCGACGCC GACGTCATAG GACCGTCTAA CCACTCCTTG
GCGGTTTTTG ACACATATCT GCCAAATGCT CGCAGCGACA ACGCAGTGGG GTATATGGGG
AAATGGCACG GCTTCACTAT CGGTGCGACT TATAGTTTTG GTCGAGATGC AGCCGGGCCT
GCTGGCCCGT CTGCGACCAA CTGTGCGGGC CAGGTTCCTG GTGACTTCGT CGCGTGTCGG
CAGTACACGG TCATGCTCGC CTATGCCTCG GAGACACTCG GTGTCACTGC GTCATATGAC
GTCATGCGCG GAGGTACGGG AGCGTCAGCG CCGCTATCAA GCAGCGCCAA TACGGACACA
CGGACAATCG TTGACGGCTA CGCAAAATAC GGAAACCTGA AGTTGGGAGC AGGGTGGATC
AGGCGAAATA CGTCGAGCAC GACTCATAGT CAATCGGACA TCTTCTTCGC GGGTGGTACC
TATCTGTTGA CACCCGCATT CGCAGTTGAC GCGCAGGCGG TTAGGTACAT ATTGCGGACG
CGTTCGGACG CGACACTGTT TGTTGGGCGC GTAAGCTACT TTCTTTCAAA ACGAACGTCA
ATCTATTCAT CTGCTGGTTA TATGATCAAC AGTCCCACTT CGGCAGTCCC GGTATCGGCG
GGCGGCACCG TCGGAATAGG TAAGAATCAG GTGGGTTTCA TGGTTGGTAT GCAGCAGCGT
TTCTAA
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| Protein sequence | MKTIRSLSLI SVSALVAGSA CAQSNVTLYG IVDTGVQYYN NATASGGSVV GMPSLSGKLP
SRFGLRGVED LGGGYKAFFV LENGFAVNNG ALGYGGRIFG RAANVGIDSR FGTLTLGRQM
NMTLYALTDA DVIGPSNHSL AVFDTYLPNA RSDNAVGYMG KWHGFTIGAT YSFGRDAAGP
AGPSATNCAG QVPGDFVACR QYTVMLAYAS ETLGVTASYD VMRGGTGASA PLSSSANTDT
RTIVDGYAKY GNLKLGAGWI RRNTSSTTHS QSDIFFAGGT YLLTPAFAVD AQAVRYILRT
RSDATLFVGR VSYFLSKRTS IYSSAGYMIN SPTSAVPVSA GGTVGIGKNQ VGFMVGMQQR
F
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