Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_3072 |
Symbol | |
ID | 6244551 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 3452595 |
End bp | 3453812 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642594874 |
Product | general secretion pathway protein F |
Protein accession | YP_001859286 |
Protein GI | 186477816 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1459] Type II secretory pathway, component PulF |
TIGRFAM ID | [TIGR02120] general secretion pathway protein F |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0000734436 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCGGCAT TCCGCTTCGA AGCGATCGAC GCCGCAGGCA AGGCGCAAAA AGGCGTACTC GATGCTGACA GCGCGCGCGG CGCGCGTACG CAGTTGCGCG GGCAAGGTCT CACGCCGCTC GTCGTCGAAC CTGCGGCGAC GCGCACACGC GGCGAACGCA GCCAGCGTCT TTCGCTGGGA CGCAAACTGT CGCAACGAGA GCAGGCGATT CTCACGCGGC AGCTTGCCAG TCTGCTGATC GCCGGCCTGC CGCTCGACGA AGCGCTCTCC GTGCTCACCG AGCAATCCGA GCGTGATTAC ATCCGTGAAC TGATGGCCGC GATCCGCGCG GAAGTGCTGG GCGGTCATTC GCTCGCGAAT GCGCTGTCGC AGCATCCGAA AGACTTCCCC GACATCTACC GCGCGCTCGT CGCGGCGGGC GAGCATACGG GCAAGCTCGG TCTCGTGCTG TCCCGTCTTG CTGACTACAT CGAGCAACGT AATGCGCTCA AGCAAAAGAT CATTCTCGCG TTCACGTATC CGACCATCGT TACGATCATC GCCTTTGGCA TCGTCACGTT CCTGCTGAGC TATGTGGTGC CGCAGGTCGT CAACGTGTTC GCGAGCACGA AGCAGCAACT GCCGTTTCTC ACCATCATGA TGATGGCGCT CTCCGGCTTC GTACGGAATT ACTGGTGGGC GATGCTGATC GCCGTGGTGA TTGTCGTGTA TGTGGTGCGC TCGATACTCG CTCAGCCTGG CCCGCGGCTT GCGTTCGACC GCTGGACGCT GACAGCCCCC CTCTTCGGCA AGCTCGTGCG CGGCTACAAC ACCGTGCGCT TTGCGAGCAC GCTGGGCATC CTGACGGCGG CGGGCGTGCC GATTCTGCGC GCGCTGCAGG CCGCAAGCGA AACGCTCAGC AACCGCGCGA TGCGAGACAA CATCGACGAT GCCATCGTGC GCGTGCGCGA AGGCACGTCG CTGTCGCGTG CGCTCGGCAA CACGAAGACG TTTCCGCCCG TGCTCGTGCA CCTGATCCGT TCGGGCGAAG CAACGGGCGA CGTGACGACG ATGCTCGACC GCGCGGCCGA AGGTGAAGCG CGTGAGCTGG AGCGGCGCAC GATGTTTCTG ACGAGTTTGC TGGAACCGCT GCTGATTCTG GCGATGGGCG GCGTGGTGCT GGTGATCGTG CTAGCCGTGA TGCTGCCGAT CATCGAGCTG AACAACCTGG TGCAGTGA
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Protein sequence | MPAFRFEAID AAGKAQKGVL DADSARGART QLRGQGLTPL VVEPAATRTR GERSQRLSLG RKLSQREQAI LTRQLASLLI AGLPLDEALS VLTEQSERDY IRELMAAIRA EVLGGHSLAN ALSQHPKDFP DIYRALVAAG EHTGKLGLVL SRLADYIEQR NALKQKIILA FTYPTIVTII AFGIVTFLLS YVVPQVVNVF ASTKQQLPFL TIMMMALSGF VRNYWWAMLI AVVIVVYVVR SILAQPGPRL AFDRWTLTAP LFGKLVRGYN TVRFASTLGI LTAAGVPILR ALQAASETLS NRAMRDNIDD AIVRVREGTS LSRALGNTKT FPPVLVHLIR SGEATGDVTT MLDRAAEGEA RELERRTMFL TSLLEPLLIL AMGGVVLVIV LAVMLPIIEL NNLVQ
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