| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_3071 |
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| Symbol | |
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| ID | 6244550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 3451043 |
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| End bp | 3452590 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642594873 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_001859285 |
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| Protein GI | 186477815 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0000785682 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGCTCGA CGCCGCTTTC CGGGCCGCAC GCCTCTGCCG GATCATCGGA CGATGCGCGC
GGCGCGCCGG AAACGCCCCC GACCCAGACA GGACGCGAAG CGCCCTCTCC GCTTGCTGCG
CGGCTCGTGC CGTACGGATT CGCGAAAAGC GGCCAGATCC TGGTCGCGCA TCAGCACGCC
GATTCGATGG AAGTCTGGAT GAGCGAACGC ACGAACCAGG CGGCGCTTGC CGAAGTCGTG
CGCAATTTCG GCGCGATATC GGTCGTGCGC ATGCCAGCGG ACGAATTGGC GCAAGCCATC
AACCAGGCGT ACGCGCGTCA GGACGGGAGC GCTGCGCAGG TGGTCGGCGA AGTGGAAGGC
GAAGTCGATT TGTCGCGTCT GATGCAGGAC ATTCCCGAAG TGGAAGACCT GCTGGAGTCC
GAAGACGACG CGCCGATCAT CCGCATGATC AACGCGCTGC TCACGCAGGC AGCGCGCGAA
CAGGCATCGG ATATTCACAT CGAGCCATTC GAAAACGCAT CGGTGGTTCG CTTTCGCGTC
GACGGCACGT TGCGCGACGT CGTGCGTCCG AAGAAGGCGC TGCACGGCGC GTTGATTTCG
CGGATCAAGA TCATGGCGCA ACTCGACATT GCCGAGAAGC GTCTGCCGCA GGATGGCCGT
ATCACGCTGC GCGTCGGCGG AAGGCCCGTC GACGTGCGCG TGTCGACGTT GCCGACGGGC
CACGGCGAAC GCGCCGTGCT GCGTCTGCTG GAAAAAGACG CGCAGCGTCT GAATCTCGAA
GCGCTCGGCA TGGCATCCGA CACGCTCAAG CAGTTCGACA AGCTGATTTC GCGTCCGCAC
GGCATCGTGC TCGTGACGGG CCCGACGGGC TCGGGCAAGA CGACCACGCT CTATGCGTCG
ATGTCGCGGC TCGAAACGGC GACGACCAAC ATCATGACCG TCGAAGACCC GATCGAATAC
GATCTGCCGG GCATTGGTCA GACTCAGGTC AACGAGCGGA TCGGCATGAC GTTCGCCCGC
GCGCTGCGTT CCATTCTTCG TCAGGATCCC GACATCATCA TGATCGGTGA GATCCGCGAT
CTGGAAACGG CGCAGATTGC CGTGCAGGCA TCGCTGACGG GACACCTGGT ACTCGCTACG
CTGCACACCA ATGACGCCGC CTCCGCCGTC ACGCGTCTGA CGGATATGGG CGTCGAGCCC
TATCTGCTCG CGTCGTCGCT GCTGGGCGTG CTGGCGCAGC GTCTCGTACG GCGGCTGTGT
CCCGTGTGCA AGGAAGCGCG CGAAGAAGAA GGCGGCCGCA AGGTGTGGCA TCCCGTCGGT
TGCGACAAGT GCGGCCATTC GGGTTATGCG GGCCGTCGCG GCGTGTATGA ACTGCTCAAT
GTCGACGAAC CGATTCGCGC GCTGATCCAC CGCAATGCTG CCGACGCCGA GATTGCCGAA
GCCGGCCGTC ATCAAGGCAT GCGCACCTTG CGCGAGGACG GCGAACGATG GCTCGCGTCG
GGCATGACGT CGCTCGAAGA AGTGATACGC GTGACGGGCG GGGTCTGA
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| Protein sequence | MSSTPLSGPH ASAGSSDDAR GAPETPPTQT GREAPSPLAA RLVPYGFAKS GQILVAHQHA
DSMEVWMSER TNQAALAEVV RNFGAISVVR MPADELAQAI NQAYARQDGS AAQVVGEVEG
EVDLSRLMQD IPEVEDLLES EDDAPIIRMI NALLTQAARE QASDIHIEPF ENASVVRFRV
DGTLRDVVRP KKALHGALIS RIKIMAQLDI AEKRLPQDGR ITLRVGGRPV DVRVSTLPTG
HGERAVLRLL EKDAQRLNLE ALGMASDTLK QFDKLISRPH GIVLVTGPTG SGKTTTLYAS
MSRLETATTN IMTVEDPIEY DLPGIGQTQV NERIGMTFAR ALRSILRQDP DIIMIGEIRD
LETAQIAVQA SLTGHLVLAT LHTNDAASAV TRLTDMGVEP YLLASSLLGV LAQRLVRRLC
PVCKEAREEE GGRKVWHPVG CDKCGHSGYA GRRGVYELLN VDEPIRALIH RNAADAEIAE
AGRHQGMRTL REDGERWLAS GMTSLEEVIR VTGGV
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