Gene Bphy_3059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_3059 
Symbol 
ID6244538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp3435306 
End bp3435788 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content58% 
IMG OID642594861 
Productnuclear protein SET 
Protein accessionYP_001859273 
Protein GI186477803 
COG category[R] General function prediction only 
COG ID[COG2940] Proteins containing SET domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.931028 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAC GCAGGATCGC TGTGCGTCAA TCGGGCGTGC ACGGCAAAGG CGTGTTTGCA 
CTCGAACCGA TCGCCGCCGG CGATCGGCTG ATCGAATATA AGGGCGAACG GATCTCGTGG
AAGGAAGCGC TGCGACGACA TCCCCACAAT CCGGACGAGC CGAATCACAC GTTCTATTTC
GCGCTCGATA GCGGTGATGT GATCGACGGC AAGGTGAAGG GCAATAGCGC GCGATGGATC
AACCACTCGT GCGCGCCCAA CTGTGAAGCG GAAGAGATTG ACGGCCATGT CTATATTGAC
GCGCTGCGCG ACATCGAAGC CGGCGAAGAA CTGTTCTACG ACTACGGGCT CGTGATCGAC
GCGCGTCAGA CGAAGAAGCT GAAGAAGGAA TACGAATGCC GCTGCGGCGC GCGCAAGTGC
CGCGGCACGA TGCTTGCGCC GCCGGACAAG AAAGACGAGA AGAAATCGAA GAAGAAGAAG
TGA
 
Protein sequence
MSSRRIAVRQ SGVHGKGVFA LEPIAAGDRL IEYKGERISW KEALRRHPHN PDEPNHTFYF 
ALDSGDVIDG KVKGNSARWI NHSCAPNCEA EEIDGHVYID ALRDIEAGEE LFYDYGLVID
ARQTKKLKKE YECRCGARKC RGTMLAPPDK KDEKKSKKKK