| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2910 |
|---|
| Symbol | dppF |
|---|
| ID | 6244393 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 3264405 |
|---|
| End bp | 3265442 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642594715 |
|---|
| Product | dipeptide transporter ATP-binding subunit |
|---|
| Protein accession | YP_001859128 |
|---|
| Protein GI | 186477658 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
|---|
| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGCAG TACCCGAAAC GCGGCGCCCG GATGGTGACA AACCCGGCAA GCCCGCAGGC
GATCTCGTGC TGGTCGCCGA CAACCTCACG CGTCACTACG ACGTAAAGCG CGGCATGTTC
GGCCACGGCA CCGTGAAGGC GCTGAACGGC GTGTCGTTTC AACTGGAACG CGGCAAGACG
CTCGCCGTAG TCGGCGAGTC CGGTTGCGGA AAATCGACGC TCGCGCGTCA GCTGACCATG
ATCGAATCGC CCACGTCCGG CCGTCTGCTG ATCGACGGCG AAGACGTGGC GGGCGCGAGC
CACGAGAAGA TTGCCCAACT GCGCCGCCGC GTGCAGATGG TGTTCCAGAA CCCGTTTGCG
TCGCTGAATC CGCGCAAGAC CGTCGAGCAG ACGCTGGCCG AGCCGCTCGC GATCAACACC
CAGCTGAACG CGAGCGAACG CGTCGAACGG ATCGCGCACA TGATGCGCGT CGTCGGCCTG
CGGCCCGAGC ATGCGAAGCG TTATCCGCAT ATGTTCTCGG GCGGCCAGCG TCAGCGTGTC
GCGATTGCGC GCGCGATGAT TCTCGACCCG CAGATCGTCG TCGCCGACGA GCCTGTCTCC
GCGTTGGACG TGTCGATCCA GGCGCAGATC CTGAACCTGT TCATGGACCT GCAGGACGAG
TTCAAGACAA GCTATGTGTT CATCTCGCAC AACCTGTCGG TGGTCGAGCA CGTTGCGGAC
GACGTGATGG TGATGTACTT CGGCGGCATT GCCGAACTCG GCGACAAGAA GCGCATTTAC
AGCAAACCGC GCCATCCGTA TACGCGGGCG CTGATGTCGG CGACGCCGTC GATCTTCGAA
GCGGACCGCC GCATCCAGAT CAAGCTGCAA GGCGAAATGC CTTCGCCGCT GAATCCGCCG
TCGGGCTGTA CGTTCCATCA GCGTTGCCCG TATGCTATCG ACCGTTGCCG CAACGAAGAG
CCGAAGCTAC GTGAAGTGGA TGGTCGTCAG GTCTCGTGTC ATCGCGCCGA GGAGGTGGGA
GAAGACACGA ATGCATGA
|
|---|
| Protein sequence | MNAVPETRRP DGDKPGKPAG DLVLVADNLT RHYDVKRGMF GHGTVKALNG VSFQLERGKT
LAVVGESGCG KSTLARQLTM IESPTSGRLL IDGEDVAGAS HEKIAQLRRR VQMVFQNPFA
SLNPRKTVEQ TLAEPLAINT QLNASERVER IAHMMRVVGL RPEHAKRYPH MFSGGQRQRV
AIARAMILDP QIVVADEPVS ALDVSIQAQI LNLFMDLQDE FKTSYVFISH NLSVVEHVAD
DVMVMYFGGI AELGDKKRIY SKPRHPYTRA LMSATPSIFE ADRRIQIKLQ GEMPSPLNPP
SGCTFHQRCP YAIDRCRNEE PKLREVDGRQ VSCHRAEEVG EDTNA
|
|---|
| |