| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2839 |
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| Symbol | rplD |
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| ID | 6244322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3179622 |
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| End bp | 3180242 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642594635 |
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| Product | 50S ribosomal protein L4 |
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| Protein accession | YP_001859057 |
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| Protein GI | 186477587 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0088] Ribosomal protein L4 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000169968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.198819 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACTTA AGCTCCTGAA CGCCAACGGT CAGGAAGGCG CAGCAGTCAA CGCGTCGGAC
GTCGTGTTCG GCCGTGACTA CAACGAAGCC CTGATCCACC AGATCGTCGT CGCTTACCAG
GCGAACGCAC GCAGCGGCAA CCGCGCGCAG AAGGATCGCG AGCAGGTCAA GCACACCACG
AAGAAGCCGT GGCGCCAGAA GGGTACGGGC CGTGCTCGTG CCGGTATGTC GTCGAGCCCG
TTGTGGCGTG GCGGTGGTCG TATCTTCCCG AATTCGCCGG AAGAAAATTT CTCGCACAAG
GTCAACAAGA AGATGCATCG CGCAGGTCTC TGCTCGATCT TCTCGCAACT GGCCCGCGAA
GGTCGCATCG CGGTTGTCGA CGAGCTCACG CTCGAAGCGC CGAAGACGAA GCTGCTGGCC
GAAAAGTTCA AGGCAATGGG TCTCGATTCC GTGCTGGTCA TCACCGACAC GGTTGACGAA
AACCTGTACC TCGCGTCGCG CAATCTGGCC CATGTGGCCG TTGTCGAGCC GCGTTACGCC
GACCCGCTGT CGCTGATCTA CTTCAAGAAA GTGCTGATCA CGAAGGCTGC GGTCGCCCAG
ATCGAGGAGT TGCTGTCATG A
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| Protein sequence | MELKLLNANG QEGAAVNASD VVFGRDYNEA LIHQIVVAYQ ANARSGNRAQ KDREQVKHTT
KKPWRQKGTG RARAGMSSSP LWRGGGRIFP NSPEENFSHK VNKKMHRAGL CSIFSQLARE
GRIAVVDELT LEAPKTKLLA EKFKAMGLDS VLVITDTVDE NLYLASRNLA HVAVVEPRYA
DPLSLIYFKK VLITKAAVAQ IEELLS
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