| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2677 |
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| Symbol | |
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| ID | 6244160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3020255 |
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| End bp | 3021667 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642594467 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase |
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| Protein accession | YP_001858895 |
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| Protein GI | 186477425 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGTTCA CACTACGTGA AGCCGCCGCG GTGATTCCGG GCGCAGCGGT AAGTGGCGAC
GATTCGATCG CATTCGAACG CGTGTCGACG GATAGCCGCA CGTGCGGTCC CGGCGATCTG
TTCGTCGCGC TCAAAGGCGA CCGCTTCGAC GCGCACGACT TTCTGTCCGA CGTCGCCGCG
CACAACGTTA GCGCCGTGCT TGCGACGCGC ACGCCCGACA ACTTCGAGGT GCCCGCGCTG
CGCGTCACGG GCGACACGCG CACGGCCCTG GGCGCATTGG CGAATGGCTG GCGGCAGCGC
TTTTCCTTGC CGCTGGTGGC CGTGACGGGC AGCAACGGCA AGACCACGGT CAAGGAAATG
ATCTCGTCGA TCTTCGCGGC GGCTGTCGGC GAAGCGTCGC GTCTCGCGAC GGCGGGCAAT
TTCAACAACG ACGTCGGCCT GCCGCTGACG CTGTTTCGGC TGAACGAAAC GCACAAGCTT
GCTGTTGTCG AGCTCGGCAT GAACCATCCG GGCGAAACTG CGCTGCTCGG CAAAATTGCC
GAGCCGACTG TCGCCGTCGT CAACAACGCG CAGCGTGAGC ATCAGGAATT CATGGCGACG
GTGGAAGCCG TCGCGCTCGA ACATGCAGCC GTGATTCACG CGCTCAAGCC TGAAGGCGTC
GCCGTGTTTC CGGCCAACGA CGCGTACGCG GGTATCTGGC GCGTCGCCGC GACAGGCAAC
CGCATTATCG ATTTCGCGCT GAATACGGCT GAACACACGA CGGAAGCTGC GGTCAAAGGC
TCGCTCGAAG GTAGCGAATT GAGCATCGAC ACCGCGGAAG GCCACGTCGA CGTCACGTTG
CAAGTGCTTG GCGCACACAA CGCGCACAAC GCATTGGCAG CGACTGCAGC CGCGCTTGCA
GCGGGCGTGT CGCTCGACGC GATCAAGCGC GGTCTCGAAG CATTCGGCGC AGTCAAAGGC
CGCTTGCAGG TGAAGCGCGC GGTGCTCGGC GCGATGGCGG GCGCGACCGT GATCGACGAC
ACGTACAACG CGAATCCCGA CTCGATGCTC GCCGCGATCG ACGTGCTCGC CGCGCGTCCT
TCGCCGCGTG TGCTGGTGAT GGGCGACATG GGTGAAGTCG GCGACAACGG CCCCGAGTTT
CATCGCGAAG TCGGCGCGTA TGCAAAGGCG CAAGGCATCG ATGCGCTGTA CGCGCTCGGC
GAGGCGTCGC GCGATGCGTG CGCCGCATAC GGCGACGAAG CGCACCACTG CGACGACGTG
GAAGCACTCG TCGCGCACTT GAAGCAAGCC GCTTACGGCG CGGCTGCAAC GTATCTCGTG
AAAGGCTCGC GCTTCATGAA AATGGAACGC GTGGTGGACG CCGTTACGAG TCCACAACCC
GCTGCACCGG GCACGGCGCC CGGCGCACAC TGA
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| Protein sequence | MMFTLREAAA VIPGAAVSGD DSIAFERVST DSRTCGPGDL FVALKGDRFD AHDFLSDVAA
HNVSAVLATR TPDNFEVPAL RVTGDTRTAL GALANGWRQR FSLPLVAVTG SNGKTTVKEM
ISSIFAAAVG EASRLATAGN FNNDVGLPLT LFRLNETHKL AVVELGMNHP GETALLGKIA
EPTVAVVNNA QREHQEFMAT VEAVALEHAA VIHALKPEGV AVFPANDAYA GIWRVAATGN
RIIDFALNTA EHTTEAAVKG SLEGSELSID TAEGHVDVTL QVLGAHNAHN ALAATAAALA
AGVSLDAIKR GLEAFGAVKG RLQVKRAVLG AMAGATVIDD TYNANPDSML AAIDVLAARP
SPRVLVMGDM GEVGDNGPEF HREVGAYAKA QGIDALYALG EASRDACAAY GDEAHHCDDV
EALVAHLKQA AYGAAATYLV KGSRFMKMER VVDAVTSPQP AAPGTAPGAH
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