Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2671 |
Symbol | ddl |
ID | 6244154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 3012766 |
End bp | 3013707 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642594461 |
Product | D-alanine--D-alanine ligase |
Protein accession | YP_001858889 |
Protein GI | 186477419 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGTA TCGATCCTAA ATCTTTCGGC AAGGTTGCCG TGCTGCTCGG CGGTGCGTCC GCCGAGCGCG AAGTGTCGCT GAACTCCGGC CGTCTCGTGC TGCAAGGCCT GCGCGATGCA GGCGTCGACG CGTATGCGTT CGATCCCGCC GAGCGTCCGC TCGCGGCATT GAAGGATGAA GGCTTCGTGC GCGCGTTCAA CGCGCTGCAC GGCGGCTATG GCGAGAACGG CCAGATTCAG GGCGCGCTCG ATTTCTACGG TATCCGTTAT ACGGGCAGCG GCGTCCTCGG CTCGGCGCTC GGTCTCGACA AGTTCCGCAC CAAGCTCGTG TGGCAGCAGC TCGGCATTCC GACGCCGCCG TTCGAAGCCG TGCTGCGCGG CGACGACTAC GCCGCGCGCG CGCAGGGCAT CGTCGCGAAG CTCGGCTTGC CGCTCTTCGT GAAGCCGGCC AGCGAAGGGT CGAGCGTTGC CGTCATCAAG GTGAAGACGG CCGACGCGCT CGTGCCCGCG CTCGAAGAAG CGGTGAAGTT CGACAAGATC GTCGTAGTGG AAAAGAGCAT CGAAGGCGGC GGCGAGTACA CGGCGTGCAT CGCGGGCGAT CTCGATCTGC CCATCATCCG CATCGTGCCC GCCGGCGAGT TCTACGACTA TCACGCGAAG TACATCGCGA ACGACACGCA GTACATGATT CCGTGCGGCA TCGCGGCTGA AGAAGAAGCG CGCCTGAAGA AGCTCGCGCG CCAGGCGTTC GACGTGCTCG GCTGCACCGA CTGGGGTCGT GCCGACTTCA TGCTGGACGG AGAAGGCAAC GCATATTTTC TCGAAGTGAA CACGGCGCCC GGCATGACGG ATCATTCGCT GCCGCCGAAG GCAGCGCGTG CTGTCGGCAT CAGCTACCAG GAACTGGTGG TGAAGGTGCT CGCGCTGACG CTGAAGGATT AA
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Protein sequence | MSGIDPKSFG KVAVLLGGAS AEREVSLNSG RLVLQGLRDA GVDAYAFDPA ERPLAALKDE GFVRAFNALH GGYGENGQIQ GALDFYGIRY TGSGVLGSAL GLDKFRTKLV WQQLGIPTPP FEAVLRGDDY AARAQGIVAK LGLPLFVKPA SEGSSVAVIK VKTADALVPA LEEAVKFDKI VVVEKSIEGG GEYTACIAGD LDLPIIRIVP AGEFYDYHAK YIANDTQYMI PCGIAAEEEA RLKKLARQAF DVLGCTDWGR ADFMLDGEGN AYFLEVNTAP GMTDHSLPPK AARAVGISYQ ELVVKVLALT LKD
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