| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2666 |
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| Symbol | lpxC |
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| ID | 6244149 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 3007490 |
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| End bp | 3008407 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642594456 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001858884 |
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| Protein GI | 186477414 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00106978 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAGC AGCGCACTAT CAAACAGATC GTCAAAACGG TTGGCATCGG CCTGCATTCA
GGGCGCAAGG TCAACCTGAC GCTCCGCCCG GCAGCGCCGG ACACGGGCAT TGTGTTCTGC
CGCGTGGATT TGCCCACGCC GGTGGACATT CCCGCGTCGG CGATGGCGAT CGGCGATACG
CGGCTCGCAT CGGTGTTGCA GAAAGACGGC GCGCGCGTGT CGACGATCGA ACACCTGATG
TCCGCGTGCG CGGGCCTCGG CATCGACAAT CTTTACGTCG ACGTCACGGC CGAAGAAATC
CCCATCATGG ACGGCAGCGC GGCGTCCTTT GTGTTCCTGA TCCAGTCGGC GGGAATCGAA
GAGCAGAACG CGGCGAAGAA ATTTATCAAG GTCACGAAGC CGGTCGAAAT CCGCGACGGC
GACAAGTTCG CACGTCTCGA TCCATACTTT GGCTTCAAGC TGAAATTCAC GATCGACTTC
CGTCATCCCG CAGTGGACAA AACCGGTCAG GCGCTCGAAG TGGACTTCGC GAACACGTCG
TATGTGCGCG AGATCGCCCG CGCCCGTACG TTCGGCTTTG CGCACGAGGT CGAGATGATG
CGTGAACTGG GGCTGGCGCG TGGCGGCAGC ATGGACAACG CAATCGTGCT GGACGAGTAC
CGCATCCTGA ACAACGACGG CCTGCGTTAC GACGACGAGT TCGTCAAGCA CAAGATGCTG
GACGCGATCG GCGATCTGTA TGTGGTCGGC CACCCTTTGC TGGCCGCGTA TGACGCGTAC
AAGTCGGGCC ACGGCCTGAA CAACGCGCTG CTGCGTGAAC TGCTGGCGCA CGAAGATTCG
TACGAAATTG TCACGTTCGA CGATCCGCTG AAGGCGCCGC GTGGTTTTGC CTACGACACG
CAGACGGCGT TCGCGTAA
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| Protein sequence | MLKQRTIKQI VKTVGIGLHS GRKVNLTLRP AAPDTGIVFC RVDLPTPVDI PASAMAIGDT
RLASVLQKDG ARVSTIEHLM SACAGLGIDN LYVDVTAEEI PIMDGSAASF VFLIQSAGIE
EQNAAKKFIK VTKPVEIRDG DKFARLDPYF GFKLKFTIDF RHPAVDKTGQ ALEVDFANTS
YVREIARART FGFAHEVEMM RELGLARGGS MDNAIVLDEY RILNNDGLRY DDEFVKHKML
DAIGDLYVVG HPLLAAYDAY KSGHGLNNAL LRELLAHEDS YEIVTFDDPL KAPRGFAYDT
QTAFA
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