Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2339 |
Symbol | |
ID | 6243825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 2623705 |
End bp | 2624901 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642594130 |
Product | monosaccharide-transporting ATPase |
Protein accession | YP_001858560 |
Protein GI | 186477090 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4214] ABC-type xylose transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.138041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.022566 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTCCTG ATCTCACCTC TTCCGATAGC CACGCAAAAC AGGGCGCTGC GCTTGCATCG GGGCAACGCA TCAAGCTGCT GTTCGCACGT TACAAGCTGC TCGCGTTGCT GCTGGCCGTC ACCGTCATCT GGGCGTTCTT CTCGTTCCTC ACGGAAGGCG CATTCGTCAC GCCGCGCAAT CTGTCGAACC TGCTGCGGCA GATGTCGATT ACGGGGATGC TCGCGTGCGG GATGGTGTTC ATCATCATCG CGGGCGAGAT CGATCTGTCC GTCGGTTCGC TGCTCGGTCT GCTCGGCGGC GTCGCGGCGA TACTCGACGT CACGTATCAC TGGCCGCTCG CGGCGACGCT GCCCGCCGTG ATGCTGCTCG GCGTGGTCGT CGGCTTGTTC AACGGCTGGT GGTCGACGTA TCGGCGCGTG CCGTCGTTCA TCGTCGGGCT GGGCGGCATG CTCGCGTATC GCGGCGTGCT GCTCGGCGTC ACGGGGGGAT CGACGATCGC GCCCGTGTCC GACAATTTCG TTTTCATCGG CCAGGGCTAC CTGCCGCGCG TGGCGGGCGA TGCACTCGCC GTCGTTCTGT TCGTCCTGCT CGCGGCACTG ACCGTGCGGC AGCGGCAAAA GCGTCAGCAC TACAAGCTGA GCGTCGTACC GCTGTGGCAG GACGTGGTGA AGATTGTCGC GGCGGGGCTG ATCCTGTTCG CGTTCGTCGC GACGCTCAAC CGTTACGGCG GCATCCCCGT GCCCGTGCTG CTGCTGCTTG CGCTGCTCGG CATCTTCACA TACATCGCGA CGCAGACGGT GTTCGGCCGC CGCATCTATG CCGTTGGCTC GAATCTCGAA GCGACGCGTT TGTCCGGCGT CAATACGAAC CGCGTGAAGC TCGCGATCTT CGCGCTGATG GGACTGATGT GCGCATTCGG CGGCCTCATC AATACGGCGC GGCTCGCAGC GGGCTCGCCG TCGGCGGGAT CGATGGGCGA ACTCGATGCG ATCGCAGCGT GTTTCATCGG CGGCACATCG ATGCGCGGCG GCTCAGGTAC CGTCTACGGC GCGCTGATCG GCGCGCTCGT GATGGCGAGC CTCGACAACG GCATGTCGAT GCTCGATGTC GACTCGTACT GGCAGATGAT CGTGAAGGGC GGCATCCTCG TGCTGGCCGT ATGGATCGAC GTGATCTCGG GGTCCGACCG GCGCTAG
|
Protein sequence | MTPDLTSSDS HAKQGAALAS GQRIKLLFAR YKLLALLLAV TVIWAFFSFL TEGAFVTPRN LSNLLRQMSI TGMLACGMVF IIIAGEIDLS VGSLLGLLGG VAAILDVTYH WPLAATLPAV MLLGVVVGLF NGWWSTYRRV PSFIVGLGGM LAYRGVLLGV TGGSTIAPVS DNFVFIGQGY LPRVAGDALA VVLFVLLAAL TVRQRQKRQH YKLSVVPLWQ DVVKIVAAGL ILFAFVATLN RYGGIPVPVL LLLALLGIFT YIATQTVFGR RIYAVGSNLE ATRLSGVNTN RVKLAIFALM GLMCAFGGLI NTARLAAGSP SAGSMGELDA IAACFIGGTS MRGGSGTVYG ALIGALVMAS LDNGMSMLDV DSYWQMIVKG GILVLAVWID VISGSDRR
|
| |