Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2186 |
Symbol | |
ID | 6243672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 2453172 |
End bp | 2455454 |
Gene Length | 2283 bp |
Protein Length | 760 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642593977 |
Product | lysine decarboxylase |
Protein accession | YP_001858407 |
Protein GI | 186476937 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1982] Arginine/lysine/ornithine decarboxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0975891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTTCC GTTTTCCCGT CGTCATCATC GACGAAGATT TCCGCTCCGA GAACATCTCG GGCTCAGGCA TCCGCGCGCT TGCCGAGGCC ATCGAAAAAG AAGGCGCGGA AGTGCTGGGT CTCACGAGCT ATGGCGATCT GACGTCGTTT GCGCAGCAGT CGAGCCGCGC GTCGTGCTTC ATCCTGTCGA TCGACGATGA CGAACTGCTG CCCTACGTCG AGAACAACGA CGGCGAGGCG CCCGACGTCG CGCCCGCGAT CGTCGATCTG CGCGCGTTCG TCGAGGCGGT GCGCAAGCGC AACGCGGACA TCCCGATCTT CCTGTACGGC GAAACGCGCA CCTCGCGTCA CCTGCCGAAC GACATCCTGC GCGAACTGCA CGGCTTCATT CACATGTTCG AGGACACGCC GGAGTTCGTC GCGCGGCACA TCATCCGCGA AGCGAAGGTA TATCTGGATT CGCTCGCGCC GCCGTTCTTC AAGGAGCTGG TGCAGTATGC GGACGAAGGC TCGTACTCGT GGCACTGTCC GGGCCACTCG GGCGGCGTCG CGTTCCTGAA AAATCCGCTT GGCCAGATGT TCCATCAGTT CTTCGGTGAG AACATGCTGC GCGCGGACGT CTGCAATGCC GTCGACGAAC TCGGCCAGCT GCTCGATCAT ACGGGCCCGG TGGCGGCATC CGAGCGCAAC GCCGCACGCA TCTTCAGCGC CGATCACCTG TTCTTCGTCA CCAACGGCAC GTCCACGTCC AACAAAATCG TCTGGCACGC GACGGTCGCG CCGGGCGACA TCGTGCTGGT GGACCGCAAC TGCCACAAGT CGATCCTGCA CGCGATCACG ATGACGCATG CGATCCCCGT GTTCCTCACG CCGACGCGCA ATCACTTCGG CATCATCGGG CCGATCCCGC GCGACGAGTT CAAGCCGGAA AACATCCGCA AGAAGATCGA GGCGAATCCG TTCGCACGCG AAGCGCTCGC GAAGAACCCG AATCTCAAGC CGCGCATTCT GACGATCACG CAAAGCACCT ATGACGGCGT GATCTACAAC GTCGAGATGA TCAAGGACCT GCTCGGCGAT CTGCTCGACA CGCTGCATTT CGACGAAGCG TGGCTGCCGC ACGCCGAGTT CCACGAGTTC TATCAGGACA TGCACGCGAT CGGCGCGGGC CGTCCGCGCA CGGGCGCGCT GGTGTTCGCG ACGCACTCGA CGCACAAGCT GCTGGCAGGC ATTTCGCAGG CTTCGCAGAT CGTCGTGCAG GATTCGGAGA ACAGCACGTT CGACCGCCAT CGGTTCAATG AGGCTTATCT GATGCACACG TCGACGAGCC CGCAGTACGC GATTATCGCG TCGTGCGACG TGGCCGCCGC GATGATGGAG CCGCCGGGCG GCACGGCGCT GGTGGAAGAA TCGATCGCCG AGGCGCTCGA TTTCCGCCGC GCGATGCGCA AGGTCGACGC CGAATACGGC GACGACTGGT TCTTCAAGGT CTGGGGTCCC GAAGAGCTGG CGGAAGAGGG CATCGGCTCG CGCGACGACT GGATGCTGCG TCCGAACGAC CGCTGGCACG GCTTCGGCCC GCTCGCGGAC GGCTTCAACA TGCTGGACCC GATCAAGGCG ACGATCATTA CGCCGGGCCT CGACGTCGAC GGCGAATTCG GCGAGACGGG CATTCCCGCT GCGATCGTCA CGAAGTATCT GGCCGAGCAC GGCATCATCG TCGAGAAGAC GGGTCTGTAT TCGTTCTTCA TCATGTTCAC GATCGGCATT ACGAAGGGCC GCTGGAACTC GATGGTCACG GAACTCCAGC AGTTCAAGGA CGACTACGAC AATAACCAGC CGCTGTGGCG CGTGCTGCCC GAGTTCGTCG CGCAACATCC CGCATACGAG CGCATCGGCC TGCGCGATCT GTGCGAGCAG ATCCACAGCG TCTATCGTGC GAACGACATC GCGCGTCTCA CGACGGAGAT GTACCTGTCG AGCATGGAGC CGGCCATGAA GCCGTCCGAC GCGTTCGCGA AGCTCGCGCA CCGCGAGATC GACCGCGTGC CCATCGACGA ACTGGAAGGC CGAGTCACGT CGATCCTGCT GACGCCGTAT CCGCCGGGCA TTCCGCTGCT GATTCCGGGC GAGCGCTTCA ACAGGACCAT CGTCAATTAC CTGCGCTTCG CACGCGAGTT CAACGAGCGC TTCCCTGGCT TCCATACGGA TATTCACGGG CTGGTCGGCG AAACGATCAA CGGGCGCATC GAGTATTTCG TCGATTGCGT GCGCGATTCG TGA
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Protein sequence | MKFRFPVVII DEDFRSENIS GSGIRALAEA IEKEGAEVLG LTSYGDLTSF AQQSSRASCF ILSIDDDELL PYVENNDGEA PDVAPAIVDL RAFVEAVRKR NADIPIFLYG ETRTSRHLPN DILRELHGFI HMFEDTPEFV ARHIIREAKV YLDSLAPPFF KELVQYADEG SYSWHCPGHS GGVAFLKNPL GQMFHQFFGE NMLRADVCNA VDELGQLLDH TGPVAASERN AARIFSADHL FFVTNGTSTS NKIVWHATVA PGDIVLVDRN CHKSILHAIT MTHAIPVFLT PTRNHFGIIG PIPRDEFKPE NIRKKIEANP FAREALAKNP NLKPRILTIT QSTYDGVIYN VEMIKDLLGD LLDTLHFDEA WLPHAEFHEF YQDMHAIGAG RPRTGALVFA THSTHKLLAG ISQASQIVVQ DSENSTFDRH RFNEAYLMHT STSPQYAIIA SCDVAAAMME PPGGTALVEE SIAEALDFRR AMRKVDAEYG DDWFFKVWGP EELAEEGIGS RDDWMLRPND RWHGFGPLAD GFNMLDPIKA TIITPGLDVD GEFGETGIPA AIVTKYLAEH GIIVEKTGLY SFFIMFTIGI TKGRWNSMVT ELQQFKDDYD NNQPLWRVLP EFVAQHPAYE RIGLRDLCEQ IHSVYRANDI ARLTTEMYLS SMEPAMKPSD AFAKLAHREI DRVPIDELEG RVTSILLTPY PPGIPLLIPG ERFNRTIVNY LRFAREFNER FPGFHTDIHG LVGETINGRI EYFVDCVRDS
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