| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2163 |
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| Symbol | |
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| ID | 6243649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | + |
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| Start bp | 2425126 |
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| End bp | 2425902 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642593954 |
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| Product | cationic amino acid ABC transporter, periplasmic binding protein |
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| Protein accession | YP_001858384 |
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| Protein GI | 186476914 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0442479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000000159985 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGAAGT ACACACTGTG CGTGGCGCTC GCCGTCATGG CTTCGGCAGC CATGGCGAAA
GAATGGAAAA CGGTGCGCAT CGGGGTCGAC GCCAGTTATC CGCCGTTCGA ATCGATCGCG
CCGAACGGCC ACATGGTCGG CTTCGACGTC GATCTGACCA AAGCGCTGTG CGCGAAGATG
AACGTGAAGT GCGTGTGGAT TGCACAGGAC CTCGACGGCA TCATCCCGGC GCTCAAGGGC
AAGAAGTACG ACATGATCGT GTCGTCGCTG ACCGTCACCG ACAAGCGCCG CGAGCAGATC
GACTTCTCCG ACAAACTGTT CGACGCGCCC GCGCGCATGA TCGCAAAGAA GGGCTCCCCG
CTGCTGCCGA CGGCAGAATC GCTGAAGGGC AAGCACGTCG GCGTCGAGCA GGGGTCGACG
CAGGAAGCGT ATGCGAAGGC GTACTGGGAG CCCAGGGGCG TGACGGTCGT GCCTTACCAG
AACCAGGACC AGGTGTACGC GGATCTGGCG ACGGGGCGTC TCGACGCTGC GTTGCAGGAC
GAGCTGCAGG CCGACTCCGG CTTCCTGAAG ACGCCACGCG GCAAGGACTT CGCGTGGGCG
GGACGGGAAG TGAAGGACGC AAAGACGATC GGCGACGGTA CAGCCATCGG CCTGCGCAAG
GAAGACGGCG AGCTCAAGGC CATGTTGAAC AAGGCGCTCG CCGACATCCA CAAAGACGGT
ACGTTCACGA AGCTCGAGAA GCAGTATTTC GACGTCGATA TTTTTCGGAG TCGCTGA
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| Protein sequence | MKKYTLCVAL AVMASAAMAK EWKTVRIGVD ASYPPFESIA PNGHMVGFDV DLTKALCAKM
NVKCVWIAQD LDGIIPALKG KKYDMIVSSL TVTDKRREQI DFSDKLFDAP ARMIAKKGSP
LLPTAESLKG KHVGVEQGST QEAYAKAYWE PRGVTVVPYQ NQDQVYADLA TGRLDAALQD
ELQADSGFLK TPRGKDFAWA GREVKDAKTI GDGTAIGLRK EDGELKAMLN KALADIHKDG
TFTKLEKQYF DVDIFRSR
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