Gene Bphy_2117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2117 
Symbol 
ID6243604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2375685 
End bp2376881 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content65% 
IMG OID642593909 
ProductGntR family transcriptional regulator 
Protein accessionYP_001858340 
Protein GI186476870 
COG category[E] Amino acid transport and metabolism
[K] Transcription 
COG ID[COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.483945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.104969 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCAAA GCGACCTCAA TGCCCCGACC TGGCAATTGT CCGAACGCGC TCGCAAGCTG 
ACCAGCTCGG CGATCCGCGA AATCCTGAAG GTCACCGAGC GGCCCGAGGT CATTTCGTTC
GCGGGCGGTC TGCCGTCGCC GGCCACTTTC CCGGCCGAGG AAATGCGCGC CGCCAGCGAC
CGCATCCTGC GCGACTCGCC CGCTGCCGCG CTCCAGTACA GCGCGACGGA AGGCTATCTT
CCATTGCGCG AATGGGTTGC GCAGCGCTAT TCGGCGAATG GCGCGCAGAT CCGTCCTTCG
CAGGTGCTGA TCACCACCGG CTCGCAGCAG GCGCTCGATC TGCTCGGCAA GGTGCTCGTC
TGCCCGCAAA GCCCGGTGCT GGTCGAAACG CCGACGTATC TCGGCGCGCT GCAGTCGTTC
TCGATGTACG AGCCGCACTA CGTGCAGGTG CCGACCGACG ATAGCGGCCT GATTCCCGAA
GGCCTCACGC CCGAACTGAC GAAGGGTGCG CGCCTGCTGT ACGCGCAGCC GAACTTCCAG
AATCCGACGG GACGCCGCCT GCCCGTCGAG CGCCGCCGCG CGCTCGCCGA ATTCGCGAAG
TCGGCGCCGT TCCCGGTGCT GGAAGACGAT CCATACGGCG CGCTCGACTA CAAGGGAGAA
CCGCTGCCGA CCATGCTGTC GATGGCGCCC GATCACATCG TGCATCTCGG CTCGTTCTCG
AAAGTGCTCG CGCCGGGTCT GCGCATCGGC TACATCATTG CGCCCGAAGA ACTGCACTTC
AAGCTCGTGC AGGCCAAGCA GGCAACCGAC CTGCACACGC CGAGCTTCAC GCAGCGCATC
GTGCACGAAG TCGTGAAGGA CGGCTTCCTC GATACGCATG TGCCGAAGAT CCGCGCGCTG
TATCGCGACC AGTGCGAAGC GATGCTCGGC TCGCTCGAGC GCTACATGCC CGAAGGCGTG
ACATGGAACC GACCAGAAGG CGGCATGTTC ATCTGGGTAT CGCTGCCGAA GCACATCGAC
TCGATGAAGC TGCTCGAAGA AGCCGTCGCG CAGAATGTGG CGTTCGTGCC GGGCGGTCCG
TTCTTCGCCA ACCAGGCACA GCACAATACG CTGCGCCTGT CGTTCGTGAC CGTGCCGCCC
GCAAAAATCG ACGAAGGCGT GGCGCGCCTC GCGCAACTCA TCCGCGCACG CGTTTGA
 
Protein sequence
MNQSDLNAPT WQLSERARKL TSSAIREILK VTERPEVISF AGGLPSPATF PAEEMRAASD 
RILRDSPAAA LQYSATEGYL PLREWVAQRY SANGAQIRPS QVLITTGSQQ ALDLLGKVLV
CPQSPVLVET PTYLGALQSF SMYEPHYVQV PTDDSGLIPE GLTPELTKGA RLLYAQPNFQ
NPTGRRLPVE RRRALAEFAK SAPFPVLEDD PYGALDYKGE PLPTMLSMAP DHIVHLGSFS
KVLAPGLRIG YIIAPEELHF KLVQAKQATD LHTPSFTQRI VHEVVKDGFL DTHVPKIRAL
YRDQCEAMLG SLERYMPEGV TWNRPEGGMF IWVSLPKHID SMKLLEEAVA QNVAFVPGGP
FFANQAQHNT LRLSFVTVPP AKIDEGVARL AQLIRARV