Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_2117 |
Symbol | |
ID | 6243604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 2375685 |
End bp | 2376881 |
Gene Length | 1197 bp |
Protein Length | 398 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642593909 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001858340 |
Protein GI | 186476870 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.483945 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.104969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATCAAA GCGACCTCAA TGCCCCGACC TGGCAATTGT CCGAACGCGC TCGCAAGCTG ACCAGCTCGG CGATCCGCGA AATCCTGAAG GTCACCGAGC GGCCCGAGGT CATTTCGTTC GCGGGCGGTC TGCCGTCGCC GGCCACTTTC CCGGCCGAGG AAATGCGCGC CGCCAGCGAC CGCATCCTGC GCGACTCGCC CGCTGCCGCG CTCCAGTACA GCGCGACGGA AGGCTATCTT CCATTGCGCG AATGGGTTGC GCAGCGCTAT TCGGCGAATG GCGCGCAGAT CCGTCCTTCG CAGGTGCTGA TCACCACCGG CTCGCAGCAG GCGCTCGATC TGCTCGGCAA GGTGCTCGTC TGCCCGCAAA GCCCGGTGCT GGTCGAAACG CCGACGTATC TCGGCGCGCT GCAGTCGTTC TCGATGTACG AGCCGCACTA CGTGCAGGTG CCGACCGACG ATAGCGGCCT GATTCCCGAA GGCCTCACGC CCGAACTGAC GAAGGGTGCG CGCCTGCTGT ACGCGCAGCC GAACTTCCAG AATCCGACGG GACGCCGCCT GCCCGTCGAG CGCCGCCGCG CGCTCGCCGA ATTCGCGAAG TCGGCGCCGT TCCCGGTGCT GGAAGACGAT CCATACGGCG CGCTCGACTA CAAGGGAGAA CCGCTGCCGA CCATGCTGTC GATGGCGCCC GATCACATCG TGCATCTCGG CTCGTTCTCG AAAGTGCTCG CGCCGGGTCT GCGCATCGGC TACATCATTG CGCCCGAAGA ACTGCACTTC AAGCTCGTGC AGGCCAAGCA GGCAACCGAC CTGCACACGC CGAGCTTCAC GCAGCGCATC GTGCACGAAG TCGTGAAGGA CGGCTTCCTC GATACGCATG TGCCGAAGAT CCGCGCGCTG TATCGCGACC AGTGCGAAGC GATGCTCGGC TCGCTCGAGC GCTACATGCC CGAAGGCGTG ACATGGAACC GACCAGAAGG CGGCATGTTC ATCTGGGTAT CGCTGCCGAA GCACATCGAC TCGATGAAGC TGCTCGAAGA AGCCGTCGCG CAGAATGTGG CGTTCGTGCC GGGCGGTCCG TTCTTCGCCA ACCAGGCACA GCACAATACG CTGCGCCTGT CGTTCGTGAC CGTGCCGCCC GCAAAAATCG ACGAAGGCGT GGCGCGCCTC GCGCAACTCA TCCGCGCACG CGTTTGA
|
Protein sequence | MNQSDLNAPT WQLSERARKL TSSAIREILK VTERPEVISF AGGLPSPATF PAEEMRAASD RILRDSPAAA LQYSATEGYL PLREWVAQRY SANGAQIRPS QVLITTGSQQ ALDLLGKVLV CPQSPVLVET PTYLGALQSF SMYEPHYVQV PTDDSGLIPE GLTPELTKGA RLLYAQPNFQ NPTGRRLPVE RRRALAEFAK SAPFPVLEDD PYGALDYKGE PLPTMLSMAP DHIVHLGSFS KVLAPGLRIG YIIAPEELHF KLVQAKQATD LHTPSFTQRI VHEVVKDGFL DTHVPKIRAL YRDQCEAMLG SLERYMPEGV TWNRPEGGMF IWVSLPKHID SMKLLEEAVA QNVAFVPGGP FFANQAQHNT LRLSFVTVPP AKIDEGVARL AQLIRARV
|
| |