| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_2013 |
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| Symbol | |
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| ID | 6243502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phymatum STM815 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010622 |
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| Strand | - |
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| Start bp | 2263257 |
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| End bp | 2265395 |
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| Gene Length | 2139 bp |
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| Protein Length | 712 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642593807 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001858238 |
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| Protein GI | 186476768 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0339212 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.44313 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCTGT TTAACAAGGT CGTCAAAGAG TTCAAGTGGG GCCAGCATAC GGTTCGCATG
GAAACGGGCG AAATCGCCCG CCAGGCGAGC GGTGCCGTGC TCGTCGACGT CGAAGACACG
GTGGTGCTGG CCACCGTCGT CGGTGCGAAG ACGGCCAAGC CGGGTCAGGA CTTCTTTCCG
CTGACCGTCG ATTACATCGA AAAGACCTAC TCGGCGGGCA AGATCCCCGG TGGCTTCTTC
CGCCGCGAAG GCCGCCCGTC GGAAGGCGAA ACGCTGATCT CGCGACTGAT CGACCGTCCG
CTGCGTCCGC TCTTCCCGGA AGGCTTCTAC AACGAAGTGC AGGTCGTCAT CCACGTGATG
TCGATCAACC CTGAAGTCCC CGCGGACATC CCCGCGCTGA TCGGTGCGTC GGCGGCGCTC
GCTGTGTCGG GACTGCCGTT CAACGGCCCC GTCGGCGCTG CGCGCGTTGC TTACATCAAC
AACGAGTACG TGCTGAACCC GACCCGCTCG CAGATCAAGG GCTCGCGTCT GGACCTCGTC
GTCGCCGGTA CGGAGCGCGC AGTGCTGATG GTCGAATCCG AGGCGGATCA ACTGCCGGAA
GACGTGATGC TTGGCGCTGT CGTGTTCGGT CACGAGCAGA TGCAAACGGC CATCGACGCG
ATCCACGAAC TGGTGCGTGA AGGCGGCAAG GCTGAGTGGG AGTGGCAGGC TGCGCCGAAG
AACGAAGCGC TGATCTCGCG CGTCAACGAA ATCGCCTACA ACGAACTGCT GTCGGCGTAC
CAGACGCGCG ACAAGCAGGC TCGCTCGACG AAGCTGAAGG AAGTGTACGC TGCGACGCAA
GCCAAGCTCG AAGAAGAAGC GGCAGCAGCG GGCACGGTGG CAGCCGACAA GGCGTCGGTG
GGCAACGTGC TGTTCGACAT CGAAGCGAAG ATCGTCCGTT CGCAGATCCT GAACGGCGAG
CCGCGTATCG ACGGCCGCGA CACGCGCACG GTGCGCCCCA TCGAAATCCG CACGGGCGTC
CTGCCGCGTA CGCACGGCTC GGCGCTCTTC ACGCGCGGCG AAACGCAGGC GCTCGTCGTC
GCGACGCTCG GCACCAAGGG CGATGAGCAG ATCATCGACG CGCTCGAAGG CGAGTACCGC
GACCGTTTCA TGCTCCACTA CAACATGCCG CCATTCGCGA CGGGCGAAAC GGGCCGCGTC
GGCTCGCCGA AGCGCCGCGA AATCGGTCAC GGCCGTCTGG CGAAGCGCGC GCTGGCCGCG
TGCCTGCCGA GCGCCGAAGA GTTCGGCTAC TCGATCCGCG TCGTGTCGGA AATCACCGAA
TCGAATGGCT CGTCGTCGAT GGCATCGGTG TGCGGCGGCT GTCTCGCGCT GATGGACGCA
GGCGTGCCGA TGAAGGCGCA CGTCGCGGGC ATCGCAATGG GGCTGATCCT CGAAGGCAAC
AAGTTCGCGG TGCTGACGGA CATCCTCGGC GACGAAGATC ATCTCGGCGA TATGGACTTC
AAGGTGGCGG GCACGGCTGA CGGCGTGACG GCACTGCAGA TGGACATCAA GATCCAGGGC
ATCACAAAGG AAATCATGCA GGTCGCGCTG GCACAGGCGA AGGAAGGCCG CATGCACATC
CTCGGCAAGA TGACCTCGGC TGTGTCCGGC GTAAACACGG AACTGTCGGC GTACGCGCCG
CGCATGATCA CCATCAAGAT CAACCCGGAA AAGATCCGGG ACGTGATCGG CAAGGGCGGT
TCGGTGATCC GCGCGCTGAC GGAAGAAACG GGCACGACGA TCGACATCTC CGACGACGGC
GTCGTCACGA TCGCGAGCAC GAGCTCGGAA GGCATGGCGG AAGCCAAGAA GCGGATCGAG
AACATCACGG CGGAAGTCGA AGTCGGTCAG GTTTACGAAG GCACGGTGCT CAAGCTGCTG
GACTTCGGCG CGATCGTCAA CCTGCTGCCG GGCAAGGACG GTCTGCTGCA CATCTCCGAA
ATCGCCAACG AGCGCATCAA GGACATCAAT GACTACCTGA AGGAAGGCCA GCAAGTGAAG
GTGAAGGTCA TTCAGACGGA CGAGAAGGGT CGCGTGCGCC TGTCGGCGAA AGCGCTCCTG
AACGAAGCAG CACAGACGGA GCCGACGCCG CAGCAGTAA
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| Protein sequence | MSLFNKVVKE FKWGQHTVRM ETGEIARQAS GAVLVDVEDT VVLATVVGAK TAKPGQDFFP
LTVDYIEKTY SAGKIPGGFF RREGRPSEGE TLISRLIDRP LRPLFPEGFY NEVQVVIHVM
SINPEVPADI PALIGASAAL AVSGLPFNGP VGAARVAYIN NEYVLNPTRS QIKGSRLDLV
VAGTERAVLM VESEADQLPE DVMLGAVVFG HEQMQTAIDA IHELVREGGK AEWEWQAAPK
NEALISRVNE IAYNELLSAY QTRDKQARST KLKEVYAATQ AKLEEEAAAA GTVAADKASV
GNVLFDIEAK IVRSQILNGE PRIDGRDTRT VRPIEIRTGV LPRTHGSALF TRGETQALVV
ATLGTKGDEQ IIDALEGEYR DRFMLHYNMP PFATGETGRV GSPKRREIGH GRLAKRALAA
CLPSAEEFGY SIRVVSEITE SNGSSSMASV CGGCLALMDA GVPMKAHVAG IAMGLILEGN
KFAVLTDILG DEDHLGDMDF KVAGTADGVT ALQMDIKIQG ITKEIMQVAL AQAKEGRMHI
LGKMTSAVSG VNTELSAYAP RMITIKINPE KIRDVIGKGG SVIRALTEET GTTIDISDDG
VVTIASTSSE GMAEAKKRIE NITAEVEVGQ VYEGTVLKLL DFGAIVNLLP GKDGLLHISE
IANERIKDIN DYLKEGQQVK VKVIQTDEKG RVRLSAKALL NEAAQTEPTP QQ
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