Gene Bphy_2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_2000 
Symbol 
ID6243489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2250736 
End bp2251404 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content62% 
IMG OID642593793 
ProductNADH dehydrogenase subunit J 
Protein accessionYP_001858225 
Protein GI186476755 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.232284 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCA CGACCGTACT GTTCTACATC TTCGCGCTAC TCCTGACGGT GTCAGGGCTG 
AAGGTGATCA CTTCGCGCAA CCCGGTGTCG TCCGCGTTGT TCCTCGTGCT CGCGTTCTTC
AACGCGGCCG CGATCTGGAT GCTGCTGCAG GCGGAATTCC TCGCGATCCT GCTGGTGCTG
GTATACGTCG GCGCGGTGAT GGTGCTGTTC CTGTTCGTCG TGATGATGCT GGACATCAAT
CTCGACGTGC TGCGACGCGA CTTCAAGCGT TTCGTGCCGA TGGCGACCGT GGTGGGCGCG
ATCATCGTGA TCGAAACGGC GCTCATCTTG TGGCACGGGT ACGGTGCAAC GGTTCAGCCG
GTGCGCGACA CGACGGCCGC CGTCGCGGGC GCCGCGGACT GGTCGAACAC GCGTCTGATC
GGCAAGATCA TCTACACCGA CTATATCTTC GCGTTCGAAG TGGCCGGCCT CGTGCTGCTC
GTTGCGATCA TCGCGGCGAT TGCGCTGACC ACGCGTCACG GCAAGGACAG CAAGCGCCAG
CGCGTGTCGG ATCAGGTCAA GGTGCGCCGC GAAGACCGTG TGCGCGTGGT CAAGATGGCG
GCTGAAAAGG AACGTCTGGC CGAACCCGAA GCCATTACCG GTGACTCGGG CGCCGGCAAG
AACAGCTGA
 
Protein sequence
MDFTTVLFYI FALLLTVSGL KVITSRNPVS SALFLVLAFF NAAAIWMLLQ AEFLAILLVL 
VYVGAVMVLF LFVVMMLDIN LDVLRRDFKR FVPMATVVGA IIVIETALIL WHGYGATVQP
VRDTTAAVAG AADWSNTRLI GKIIYTDYIF AFEVAGLVLL VAIIAAIALT TRHGKDSKRQ
RVSDQVKVRR EDRVRVVKMA AEKERLAEPE AITGDSGAGK NS