Gene Bphy_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1949 
Symbol 
ID6243438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp2193636 
End bp2194508 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content65% 
IMG OID642593737 
Productpirin domain-containing protein 
Protein accessionYP_001858174 
Protein GI186476704 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.199065 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCGA CCCGCACGAT CGAACGCACG TATCCTTCCG TACGCACGGT TGAGGGCGGC 
GGTTTTGTCG TCCACCGCCC GTTCCCGACC CGCATGCTGA TGGACTTCGA CCCGTTTCTG
CTGCTCGACG AAATGGGCCC GATCGACTAC GCGCCCGGCG AGGCGAAAGG CGCGCCCGAT
CATCCGCACC GCGGCTTCGA AACGGTCACA TACGTGCTCG AAGGCCAGTT CGGCCATCAA
GATTCGGCGG GCCACTCGGG CACGCTGCGC GCCGGCGACG TCCAGTGGAT GACGGCGGGC
GCGGGCGTCG TGCACAGCGA AATGCCCGAC CCATCGTTCG TCGCGACGGG CGGCCGCGTG
CATGGACTGC AGTTGTGGGT GAACCTGCCT AAGCGCGACA AGATGATCGC GCCGCGCTAT
CAGGAAATGC CGTCTGCGGG CATCCCCGTC GCGACGTCCG ACGACGGCAA GGTGCGAGTC
AAGGTGATCG CGGGAGAAGC GCTTGGCGTG AAGGCCACGA TCGAAACGCG CACGCCGATC
CTGTACCAGC ATTTCACGCT GCAGCCGGGC GCGCGGATCG TGCATCCCGT GCCGCGCGAC
TATCGCGTGT TCGCTTACGG ATTGACAGGC AAAGGTTTTT ATAGCGACGA GCGGCTCGAA
ATCGGGCCGC AGCAGATGAT CGTGTTTGAC AACGACGGCG ACACGGTGAC GATCGCCGCC
GGCGACGAGC CGCTCGATGT GCTGCTGTTC GGCGGCGTGC CGCTGAACGA GCCGGTCGTG
CGCTACGGCC CGTTCGTGAT GAACACGGAA GACGAGATCC GTCAGGCGGT GGTCGACTAT
CAGGCGGGCC GCATGGGGCA GATCGCGCAC TAG
 
Protein sequence
MSATRTIERT YPSVRTVEGG GFVVHRPFPT RMLMDFDPFL LLDEMGPIDY APGEAKGAPD 
HPHRGFETVT YVLEGQFGHQ DSAGHSGTLR AGDVQWMTAG AGVVHSEMPD PSFVATGGRV
HGLQLWVNLP KRDKMIAPRY QEMPSAGIPV ATSDDGKVRV KVIAGEALGV KATIETRTPI
LYQHFTLQPG ARIVHPVPRD YRVFAYGLTG KGFYSDERLE IGPQQMIVFD NDGDTVTIAA
GDEPLDVLLF GGVPLNEPVV RYGPFVMNTE DEIRQAVVDY QAGRMGQIAH