Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1941 |
Symbol | |
ID | 6243430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | + |
Start bp | 2186303 |
End bp | 2187826 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642593729 |
Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
Protein accession | YP_001858166 |
Protein GI | 186476696 |
COG category | [C] Energy production and conversion |
COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain [COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region [TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.757012 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGTCA TCAAACAGGA AGACCTGATC CAGAGTATTG CGGACTCCCT GCAATACATC AGCTACTACC ATCCGCTCGA TTACATCGAG GCGCTCGGCC GCGCATACGA GCTCGAAGAA AGCCCCGCCG CCAAGGACGC CATCGCGCAG ATCCTGACGA ACAGCCGTAT GTGCGCGGAA GGCAAGCGCC CGATCTGCCA GGACACGGGC ATCGTCACGG TATTCGTGAA GGTCGGCATG GACGTGCGCT GGGATGGCGC GACGATGTCG GTCACCGACA TGATCAACGA AGGCGTGCGA CGCGGTTATC TGAACCCGGA CAACGTGCTG CGCGCGTCGA TCGTGAGCCC GCCCGAAGGC GGCCGCAAGA ACACGAAGGA CAACACCCCC GCCGTGATCC ACTACGAGAT CGTGCCGGGC GACAAGGTCG ACGTGCAGGT CGCGGCGAAG GGCGGCGGCT CGGAGAACAA GTCGAAGTTC GCGATGCTGA ACCCGTCGGA TTCGATCGTT GACTGGATCC TGAAGACCGT GCCGACGATG GGCGCGGGCT GGTGCCCGCC CGGCATGCTC GGCATCGGCA TCGGCGGCAC GGCTGAAAAG GCGATGGTCA TGGCGAAGGA ATCGCTGATG GACCCGATCG ACATTCAGGA CGTCATCGCT CGCGGCCCGA AGGACTGGAT CGAAGAACTG CGTGTGGAAC TGCACGAGAA AGTCAACGCG CTCGGTATCG GCGCGCAGGG CTTGGGCGGT CTCGCGACGG TGCTCGACGT GAAGATCATG GCAGCGCCGA CGCACGCGGC ATCGAAGCCG GTCGCAATCA TCCCGAACTG CGCGGCCACG CGCCACGCGC ACTTCACGCT CGACGGCTCG GGCGTCGCGA AGCTCACGCC GCCGCCGCTC GACGCATGGC CGAAGGTCAC GTGGCAACCG AACACGGAAA CCAGCAAGCG CATCGACCTG AACACGCTGA CGCCGGAAGA AGTCGCATCG TGGACGCCGG GCCAGACGCT CTTGCTGTCG GGCAAGATGC TGACGGGCCG CGACGCCGCG CACAAGCGCA TCGCCGACAT GCTCGCCAAG GGCGAAAAGC TGCCCGTCGA CTTCACGAAC CGCGTGATCT ATTACGTCGG CCCGGTCGAC CCGGTGCGCG ATGAAGCCGT CGGCCCGGCC GGCCCGACGA CGGCCACGCG CATGGACAAG TTCACGGAAA CGATGCTCGC GCAAACGGGG CTGATCTCGA TGATCGGCAA GGCCGAGCGC GGCCCCGTCG CGATCGAGGC GATCAGGAAG CACAAGGCTG CGTATCTGAT GGCCGTCGGC GGTGCGGCGT ACCTCGTGTC GAAGGCGATC CGCAGCGCGA AGGTGCTTGC ATTCGAGGAC CTCGGCATGG AAGCCATCTA TGAATTCGAC GTACAGGACA TGCCTGTGAC GGTCGCCGTC GATTCGAACG GCACCTCGGT TCACCAGACG GGACCGAAGG AATGGCAGGC GAAGATCGGC AAGATTCCCG TCGCGACGGC TTAA
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Protein sequence | MTVIKQEDLI QSIADSLQYI SYYHPLDYIE ALGRAYELEE SPAAKDAIAQ ILTNSRMCAE GKRPICQDTG IVTVFVKVGM DVRWDGATMS VTDMINEGVR RGYLNPDNVL RASIVSPPEG GRKNTKDNTP AVIHYEIVPG DKVDVQVAAK GGGSENKSKF AMLNPSDSIV DWILKTVPTM GAGWCPPGML GIGIGGTAEK AMVMAKESLM DPIDIQDVIA RGPKDWIEEL RVELHEKVNA LGIGAQGLGG LATVLDVKIM AAPTHAASKP VAIIPNCAAT RHAHFTLDGS GVAKLTPPPL DAWPKVTWQP NTETSKRIDL NTLTPEEVAS WTPGQTLLLS GKMLTGRDAA HKRIADMLAK GEKLPVDFTN RVIYYVGPVD PVRDEAVGPA GPTTATRMDK FTETMLAQTG LISMIGKAER GPVAIEAIRK HKAAYLMAVG GAAYLVSKAI RSAKVLAFED LGMEAIYEFD VQDMPVTVAV DSNGTSVHQT GPKEWQAKIG KIPVATA
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