| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1744 |
|---|
| Symbol | |
|---|
| ID | 6243235 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | + |
|---|
| Start bp | 1987323 |
|---|
| End bp | 1988597 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642593534 |
|---|
| Product | diguanylate phosphodiesterase |
|---|
| Protein accession | YP_001857972 |
|---|
| Protein GI | 186476502 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.943154 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTAACG TCGACGATAC GACGCTCACC GGCCTTCTGC AGCACATGGT GCAGGACGAG
GCCGGATGGG CTGCGCCGTG GCGAACCATT ACCTTGCGCA GCGTTTTCCA GCCGGTCGTC
TCCGTGACGC ATCAGCGCGT GGTCGGCTAT GAGGCGTTGC TGCGCGCCTT CGATCCCGTC
GGCCATCCCA TCTCGCCCGC CGTACTGTTC TCGGGCACCC GCTCGACAGG CGAGGCGCGC
GCGCTCGATC GTCTCGCGCG CTGCCTGCAT GTAGCGAACT TCATGGCGCA AGGCATCGCG
ACGGGATGGC TGTTCCTGAA CACGCGTCCG CAGGTATTCG AAACGGGCTG GCCGCAGCGC
CCGTTCATCG ACGAACTGTC GGAGCATTTC GGACTGCCGC AGGAACGCAT CGTGATCGAA
GTGCTCGAGC AGCCGGCCGA TGATGAATCG GCCGTCGCCA GCATGCTCGC CGCATCCCAG
CCGCGAGAAT TCCTGATCGC CATCGACGAC TTCGGCACCG GCTTTTCTAA CTTCGACCGC
GTGTGGCGCT TCCGGCCGGA CATCGTGAAA CTCGACCGCT CGCTGGTGGC GCGCGCCGGC
CGCCAGGACA ACGATAATTC GCTGATCGCT CATCTGATCA ACATGCTGCA TCAATCGGGC
ACGCTGGTGC TGGCGGAAGG CGTCGAAACG GAAAACGAAC TGATGACGTT GATGCAGGCC
GACGTCGATT TCGTCCAGGG TTACTGGTTC GGCCAACCGA AGGGCTCGAT CCAGGCGGCG
AGCGCGCGCG TGCCCGAGCT GCTCGAACAG ATGTGGACAC GTTTCGAGAG CTACGAGCAA
ACGCATTCGC GCTATCAGCG GCCCGGCTTC GAGGGCTTTA CGGAAGCCGT GCTCGCGGGC
GCGTCGCTGT ATATGCAGAC AGGCGATCTC GAACAAGCCG CGAAGCCTGT CTTCCTCGTG
CCCGATGCGC GCCGCGTCTT CGTGCTGAAC GATCGCGGCG AACAGCTGGC GCCGTCGATC
ACCGCGCGCG GCACGCCGCC TCCCCCTGCC CGCCTCGCAC CGCTCTTGCC CGACACGCAC
AACAACTGGT CGCGGCGCGC ATATTTCAAG CACGCGCTCG CCGCGCCGGG CCGTGTCGCG
ATGATGGGGC CGCACTGTTC GCTGATGGAC GGCCAGGATT GCTACACGGC CGCCGTGACC
GTCGAGCGCA ACGGTCAGAC GCATGTGTTT TGCGTCGATT TCCTACCCGA AATGCGCAAC
GCAAGCACCG TGTGA
|
|---|
| Protein sequence | MPNVDDTTLT GLLQHMVQDE AGWAAPWRTI TLRSVFQPVV SVTHQRVVGY EALLRAFDPV
GHPISPAVLF SGTRSTGEAR ALDRLARCLH VANFMAQGIA TGWLFLNTRP QVFETGWPQR
PFIDELSEHF GLPQERIVIE VLEQPADDES AVASMLAASQ PREFLIAIDD FGTGFSNFDR
VWRFRPDIVK LDRSLVARAG RQDNDNSLIA HLINMLHQSG TLVLAEGVET ENELMTLMQA
DVDFVQGYWF GQPKGSIQAA SARVPELLEQ MWTRFESYEQ THSRYQRPGF EGFTEAVLAG
ASLYMQTGDL EQAAKPVFLV PDARRVFVLN DRGEQLAPSI TARGTPPPPA RLAPLLPDTH
NNWSRRAYFK HALAAPGRVA MMGPHCSLMD GQDCYTAAVT VERNGQTHVF CVDFLPEMRN
ASTV
|
|---|
| |