Gene Bphy_1720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphy_1720 
Symbol 
ID6243211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phymatum STM815 
KingdomBacteria 
Replicon accessionNC_010622 
Strand
Start bp1957887 
End bp1959158 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content64% 
IMG OID642593510 
Productdihydrolipoamide succinyltransferase 
Protein accessionYP_001857948 
Protein GI186476478 
COG category[C] Energy production and conversion 
COG ID[COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes 
TIGRFAM ID[TIGR01347] 2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component) 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATTG TTGAAGTCAA GGTCCCCCAG CTGTCCGAGT CGGTCTCGGA AGCCACGATG 
CTGCAGTGGA AGAAGAAGCC GGGTGAGGCT GTCGCCCAGG ACGAAATCCT GATCGAAATC
GAAACCGACA AGGTCGTGCT CGAAGTGCCG GCTCCGTCGG CAGGCGTGCT CGCGCAAGTC
ATCAAGAACG ACGGCGACAT TGTCACGGCC GACGAAGTGA TCGCGAAGAT CGACACGGAA
GGCAAGCCGG GCGCCGCGGC GGTCGAAGCC GAAGTGAAGC CGGCTCCGCA AGCTGAACCG
GTTGCTGCCG CCGCGGCGCA AGCGGCAGCC GTGGCCGGCG CAAGCACGGC GGCATCGCCG
GCTGCGACGA AGATCCTGGC CGAGAAGGGC GTGGCTGCGA GCGACGTCGC TGGCACGGGC
CGCGATGGCC GCATCACCAA GCAGGACGCC GTCGCCGCCG GCGCACCGGC AGCCAAGGCT
GCACCGGCAC CGGCAGCCGC GCCCGCACGG GCTGCGAAAC CGTCGCTGCC GCAAGTGGGC
GCACCGGCAT CGGCCGAGCA ATGGCTGAAG GACCGCCCGG AACAGCGCGT CCCGATGTCG
CGTCTGCGTG CGCGTATCGC TGAGCGCCTG CTCGAGTCGC AGCAAACCAA CGCCATCCTC
ACGACGTTCA ACGAAGTGAA CATGGCGCCC GTCATGGATC TGCGCAACAA GTACAAGGAC
AAGTTCGAGA AGGAACATGG CGTGAAGCTT GGCTTCATGT CGTTCTTCGT GAAGGCGGCT
GTCCACGCGC TGAAGAAGTT CCCGCTAGTG AACGCGTCGA TCGACGGGAA CGACATCGTC
TACCACGGCT ACTTCGACAT CGGTATTGCC GTCGGTTCGC CGCGCGGTCT GGTGGTGCCG
ATCCTGCGCA ACGCCGACCA GATGAGCCTC GCCGATATCG AGAAGAAGAT CGCCGAATTC
GGCCAGAAGG CGAAGGACGG CAAGCTGTCG ATCGAAGAAA TGACGGGCGG CACGTTCTCG
ATTTCGAACG GCGGCGTGTT CGGCTCGATG CTGTCGACGC CGATCATCAA CCCGCCGCAG
TCGGCCATTC TCGGCGTGCA CGCAACGAAG GAGCGCGCGG TCGTCGAAAA CGGTCAGATC
GTGATCCGTC CGATGAACTA TCTGGCGCTG TCGTACGACC ACCGCATCAT CGACGGCCGC
GAAGCGGTGC TGTCGCTGGT CGCGATGAAG GACGCGCTGG AAGATCCCGC ACGCCTGCTG
CTCGACCTGT AA
 
Protein sequence
MAIVEVKVPQ LSESVSEATM LQWKKKPGEA VAQDEILIEI ETDKVVLEVP APSAGVLAQV 
IKNDGDIVTA DEVIAKIDTE GKPGAAAVEA EVKPAPQAEP VAAAAAQAAA VAGASTAASP
AATKILAEKG VAASDVAGTG RDGRITKQDA VAAGAPAAKA APAPAAAPAR AAKPSLPQVG
APASAEQWLK DRPEQRVPMS RLRARIAERL LESQQTNAIL TTFNEVNMAP VMDLRNKYKD
KFEKEHGVKL GFMSFFVKAA VHALKKFPLV NASIDGNDIV YHGYFDIGIA VGSPRGLVVP
ILRNADQMSL ADIEKKIAEF GQKAKDGKLS IEEMTGGTFS ISNGGVFGSM LSTPIINPPQ
SAILGVHATK ERAVVENGQI VIRPMNYLAL SYDHRIIDGR EAVLSLVAMK DALEDPARLL
LDL