| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphy_1608 |
|---|
| Symbol | |
|---|
| ID | 6243099 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phymatum STM815 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010622 |
|---|
| Strand | - |
|---|
| Start bp | 1826530 |
|---|
| End bp | 1826982 |
|---|
| Gene Length | 453 bp |
|---|
| Protein Length | 150 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642593394 |
|---|
| Product | thioesterase superfamily protein |
|---|
| Protein accession | YP_001857836 |
|---|
| Protein GI | 186476366 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0824] Predicted thioesterase |
|---|
| TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAC CTGCTCCCGC GCCGCGCACG GCTTACCCGC ACTTTCTTTG CATCGGTACG
CGCTGGATGG ACAACGATAT CTACGGCCAC GTGAACAACG TCGTCTATTA CAGCTACTTC
GACACGGTCG TGAACGAGTA TCTGATTCGC ACGGGCGCAC TCGATATCGA ACACAGCACG
ACGATCGGTC TCGTCGTCGA AACGCAGTGC AACTACTTCG CGCCCATCGT GTTTCCGGAT
CGTATCGATG CGGGGCTGCG CGTGGTGCGC CTCGGCGCAT CGAGCGTGCG CTACGAAGTG
GGGCTGTTCA TGGAAGGCGA CGCTCAACCT GCTGCGCAAG GTCATTTCGT GCACGTCTAC
GTGGATCGCG AGACGCGCCG CCCGGTCGCG CTGTCCGACG CGCTGCGCGC CGCGCTCGAG
CCGCTCGTCG TGCAAGCCGC GCGGGCGGAC TGA
|
|---|
| Protein sequence | MNKPAPAPRT AYPHFLCIGT RWMDNDIYGH VNNVVYYSYF DTVVNEYLIR TGALDIEHST
TIGLVVETQC NYFAPIVFPD RIDAGLRVVR LGASSVRYEV GLFMEGDAQP AAQGHFVHVY
VDRETRRPVA LSDALRAALE PLVVQAARAD
|
|---|
| |