Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphy_1566 |
Symbol | |
ID | 6243057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phymatum STM815 |
Kingdom | Bacteria |
Replicon accession | NC_010622 |
Strand | - |
Start bp | 1773552 |
End bp | 1774328 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642593352 |
Product | short chain dehydrogenase |
Protein accession | YP_001857794 |
Protein GI | 186476324 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCCGTT CGATCAATCT GGAAGGCAAG GTGGCGCTGG TTACGGGCGC GTCGAGTGGA CTGGGCAAGC GGTTTGCGAT GGTGTTGTCG CAGGCTGGCG CAAAGGTCGT GCTGGCAAGC CGACGTATCG AACGCCTGAA GGAATTGCGC GCTGAGATCG AAGCGTCGGG CGGCGCTGCG GCTGTCGTTT CTCTCGACGT GACCGACTAT CAGAGCATCA AGTCCGCCGT TGCGCATGCC GAAACGGAAG CGGGCACAAT CGACATTCTG GTCAACAATT CGGGTGTGTC GACGACGCAG AAGCTGACGG ACGTGACGCC TGCCGATTTC GAATACGTGT TCGACACGAA CACACGCGGC GCGTTTTTCG TCGCGCAGGA AGTGGCCAAG CGGATGATCA TGCGCGGCGG CGGAACGAAC AAGCCGCCGT ACCGGATCAT CAACATCGCA TCGGTGGCGG GTTTGCGGGT GCTGCCGCAG ATCGGGCTCT ATTCGATGAG CAAGGCGGCC GTCGTGCATA TGACGAAGGC GATGGCGCAG GAGTGGGGCC GCCACGGCAT CAATGTGAAC GCGATCTGCC CCGGCTATAT CGATACCGAG ATCAACCACC ATCACTGGTC GACCGAGCAA GGGCAGAAGC TGGTGTCGAT GTTGCCGAGG CATCGTGTGG GCAAGCCGGA AGATCTCGAT GGGCTGTTGC TGCTGCTCTG CGCCGACGAA TCGCAGTTCA TCAACGGTTC GGTGATTGCC GCCGACGACG GCTTCGGCCT GTCGTGA
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Protein sequence | MGRSINLEGK VALVTGASSG LGKRFAMVLS QAGAKVVLAS RRIERLKELR AEIEASGGAA AVVSLDVTDY QSIKSAVAHA ETEAGTIDIL VNNSGVSTTQ KLTDVTPADF EYVFDTNTRG AFFVAQEVAK RMIMRGGGTN KPPYRIINIA SVAGLRVLPQ IGLYSMSKAA VVHMTKAMAQ EWGRHGINVN AICPGYIDTE INHHHWSTEQ GQKLVSMLPR HRVGKPEDLD GLLLLLCADE SQFINGSVIA ADDGFGLS
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